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HPV+ and HPV- head and neck squamous cell carcinoma by analysis of tumor microenviroment

The Moldovan Medical Journal, 2021-09, Vol.64 (3), p.50-53

Brinza, Dumitru

2021

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Profiling molecular regulators of recurrence in chemorefractory triple-negative breast cancers

Breast cancer research : BCR, 2019-08, Vol.21 (1), p.87-87, Article 87

2019

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Next-generation sequencing of circulating tumor DNA to predict recurrence in triple-negative breast cancer patients with residual disease after neoadjuvant chemotherapy

NPJ breast cancer, 2017-07, Vol.3 (1), p.24-6, Article 24

2017

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Single cell genome amplification accelerates identification of the apratoxin biosynthetic pathway from a complex microbial assemblage

PloS one, 2011-04, Vol.6 (4), p.e18565-e18565

2011

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2SNP: scalable phasing based on 2-SNP haplotypes

Bioinformatics, 2006-02, Vol.22 (3), p.371-373

2006

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TRIP: a method for novel transcript reconstruction from paired-end RNA-seq reads

BMC bioinformatics, 2012-12, Vol.13 (S18), p.A11-A11, Article A11

2012

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De novo fragment assembly with short mate-paired reads: Does the read length matter?

Genome Research, 2009-02, Vol.19 (2), p.336-346

2009

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Abstract 2402: A research approach for the detection of somatic mutations at 0.5% frequency from cfDNA and cTc DNA using a multiplex sequencing assay targeting 2000 tumor mutations

Cancer research (Chicago, Ill.), 2015-08, Vol.75 (15_Supplement), p.2402-2402

2015

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Development of a breast and lung cancer research panel to target therapeutically relevant copy number and gene fusion variants from blood

Journal of clinical oncology, 2017-05, Vol.35 (15_suppl), p.e12518-e12518

2017

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RAPID detection of gene–gene interactions in genome-wide association studies

Bioinformatics, 2010-11, Vol.26 (22), p.2856-2862

2010

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Abstract 3622: Complete workflow for detection of low frequency somatic mutations from cell-free DNA using Ion Torrent™ platforms

Cancer research (Chicago, Ill.), 2016-07, Vol.76 (14_Supplement), p.3622-3622

2016

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Abstract 5396: An NGS workflow to detect down to 0.1% allelic frequency in cfDNA for breast and colon cancers

Cancer research (Chicago, Ill.), 2017-07, Vol.77 (13_Supplement), p.5396-5396

2017

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Abstract 4931: A circulating cell free DNA workflow for targeted sequencing - from isolation through validation

Cancer research (Chicago, Ill.), 2015-08, Vol.75 (15_Supplement), p.4931-4931

2015

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Abstract 3959: Detection of somatic mutations at 0.1% frequency from cfDNA in peripheral blood with a multiplex next-generation sequencing assay

Cancer research (Chicago, Ill.), 2016-07, Vol.76 (14_Supplement), p.3959-3959

2016

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Comprehensive detection of ctDNA variants at 0.1% allelic frequency using a broad targeted NGS panel for liquid biopsy research

Journal of clinical oncology, 2017-05, Vol.35 (15_suppl), p.e23065-e23065

2017

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Transcriptome assembly and quantification from Ion Torrent RNA-Seq data

BMC genomics, 2014, Vol.15 Suppl 5 (S5), p.S7-S7, Article S7

2014

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Design and validation of methods searching for risk factors in genotype case-control studies

Journal of computational biology, 2008-01, Vol.15 (1), p.81-90

2008

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Combinatorial Methods for Disease Association Search and Susceptibility Prediction

Algorithms in Bioinformatics, p.286-297

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Phasing of 2-SNP Genotypes Based on Non-random Mating Model

Computational Science – ICCS 2006, 2006, p.767-774

2006

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2SNP: Scalable Phasing Method for Trios and Unrelated Individuals

IEEE/ACM transactions on computational biology and bioinformatics, 2008-04, Vol.5 (2), p.313-318

2008

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The influence of diabetes mellitus on blood vessels amount in case of breast cancer

Moldovan Journal of Health Sciences, 2023-04, Vol.10 (1), p.3-8

2023

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Discrete algorithms for analysis of genotype data

Brinza, Dumitru

2007

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Family trio phasing and missing data recovery

International journal of bioinformatics research and applications, 2005, Vol.1 (2), p.221

2005

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Phasing and Missing Data Recovery in Family Trios

Computational Science – ICCS 2005, 2005, p.1011-1019

2005

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Association testing by haplotype-sharing methods applicable to whole-genome analysis

BMC proceedings, 2007-12, Vol.1 Suppl 1 (S1), p.S129-S129, Article S129

2007

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HPV+ and HPV- head and neck squamous cell carcinoma by analysis of tumor microenviroment

Profiling molecular regulators of recurrence in chemorefractory triple-negative breast cancers

Next-generation sequencing of circulating tumor DNA to predict recurrence in triple-negative breast cancer patients with residual disease after neoadjuvant chemotherapy

Single cell genome amplification accelerates identification of the apratoxin biosynthetic pathway from a complex microbial assemblage

2SNP: scalable phasing based on 2-SNP haplotypes

TRIP: a method for novel transcript reconstruction from paired-end RNA-seq reads

De novo fragment assembly with short mate-paired reads: Does the read length matter?

Abstract 2402: A research approach for the detection of somatic mutations at 0.5% frequency from cfDNA and cTc DNA using a multiplex sequencing assay targeting 2000 tumor mutations

Development of a breast and lung cancer research panel to target therapeutically relevant copy number and gene fusion variants from blood

RAPID detection of gene–gene interactions in genome-wide association studies

Abstract 3622: Complete workflow for detection of low frequency somatic mutations from cell-free DNA using Ion Torrent™ platforms

Abstract 5396: An NGS workflow to detect down to 0.1% allelic frequency in cfDNA for breast and colon cancers

Abstract 4931: A circulating cell free DNA workflow for targeted sequencing - from isolation through validation

Abstract 3959: Detection of somatic mutations at 0.1% frequency from cfDNA in peripheral blood with a multiplex next-generation sequencing assay

Comprehensive detection of ctDNA variants at 0.1% allelic frequency using a broad targeted NGS panel for liquid biopsy research

Transcriptome assembly and quantification from Ion Torrent RNA-Seq data

Design and validation of methods searching for risk factors in genotype case-control studies

Combinatorial Methods for Disease Association Search and Susceptibility Prediction

Phasing of 2-SNP Genotypes Based on Non-random Mating Model

2SNP: Scalable Phasing Method for Trios and Unrelated Individuals

The influence of diabetes mellitus on blood vessels amount in case of breast cancer

Discrete algorithms for analysis of genotype data

Family trio phasing and missing data recovery

Phasing and Missing Data Recovery in Family Trios

Association testing by haplotype-sharing methods applicable to whole-genome analysis

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