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Orientation-aware plasma cell-free DNA fragmentation analysis in open chromatin regions informs tissue of origin

Genome research, 2019-03, Vol.29 (3), p.418-427

2019

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Plasma DNA aberrations in systemic lupus erythematosus revealed by genomic and methylomic sequencing

Proceedings of the National Academy of Sciences - PNAS, 2014-12, Vol.111 (49), p.E5302-E5311

2014

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Methy-Pipe: an integrated bioinformatics pipeline for whole genome bisulfite sequencing data analysis

PloS one, 2014-06, Vol.9 (6), p.e100360-e100360

2014

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Lengthening and shortening of plasma DNA in hepatocellular carcinoma patients

Proceedings of the National Academy of Sciences - PNAS, 2015-03, Vol.112 (11), p.E1317-E1325

2015

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Cell-free DNA for Colorectal Cancer Screening

The New England journal of medicine, 2024-03, Vol.390 (11), p.1047-1050

2024

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Enhanced cancer detection from cell-free DNA

Nature biotechnology, 2022-04, Vol.40 (4), p.473-474

2022

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Genome-wide detection of cytosine methylation by single molecule real-time sequencing

Proceedings of the National Academy of Sciences - PNAS, 2021-02, Vol.118 (5)

2021

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Noninvasive Prenatal Diagnosis of Congenital Adrenal Hyperplasia Using Cell-Free Fetal DNA in Maternal Plasma

The journal of clinical endocrinology and metabolism, 2014-06, Vol.99 (6), p.E1022-E1030

2014

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Maternal plasma DNA sequencing reveals the genome-wide genetic and mutational profile of the fetus

Science translational medicine, 2010-12, Vol.2 (61), p.61ra91

2010

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Noninvasive detection of cancer-associated genome-wide hypomethylation and copy number aberrations by plasma DNA bisulfite sequencing

Proceedings of the National Academy of Sciences - PNAS, 2013-11, Vol.110 (47), p.18761-18768

2013

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Size-based molecular diagnostics using plasma DNA for noninvasive prenatal testing

Proceedings of the National Academy of Sciences - PNAS, 2014-06, Vol.111 (23), p.8583-8588

2014

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Sequencing-based counting and size profiling of plasma Epstein–Barr virus DNA enhance population screening of nasopharyngeal carcinoma

Proceedings of the National Academy of Sciences - PNAS, 2018-05, Vol.115 (22), p.E5115-E5124

2018

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Single-Molecule Sequencing Enables Long Cell-Free DNA Detection and Direct Methylation Analysis for Cancer Patients

Clinical chemistry (Baltimore, Md.), 2022-09, Vol.68 (9), p.1151-1163

2022

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Prenatal Diagnosis Innovation: Genome Sequencing of Maternal Plasma

Annual review of medicine, 2016-01, Vol.67 (1), p.419-432

2016

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Comparison of Single Molecule, Real-Time Sequencing and Nanopore Sequencing for Analysis of the Size, End-Motif, and Tissue-of-Origin of Long Cell-Free DNA in Plasma

Clinical chemistry (Baltimore, Md.), 2023-02, Vol.69 (2), p.168-179

2023

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Noninvasive Prenatal Diagnosis of Monogenic Diseases by Digital Size Selection and Relative Mutation Dosage on DNA in Maternal Plasma

Proceedings of the National Academy of Sciences - PNAS, 2008-12, Vol.105 (50), p.19920-19925

2008

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Methylation analysis of plasma DNA informs etiologies of Epstein-Barr virus-associated diseases

Nature communications, 2019-07, Vol.10 (1), p.3256-11, Article 3256

2019

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Jagged Ends of Urinary Cell-Free DNA: Characterization and Feasibility Assessment in Bladder Cancer Detection

Clinical chemistry (Baltimore, Md.), 2021-04, Vol.67 (4), p.621-630

2021

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Noninvasive detection of F8 int22h-related inversions and sequence variants in maternal plasma of hemophilia carriers

Blood, 2017-07, Vol.130 (3), p.340-347

2017

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High-resolution analysis for urinary DNA jagged ends

Npj genomic medicine, 2022-02, Vol.7 (1), p.14-14, Article 14

2022

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Towards multi-cancer screening using liquid biopsies

Nature reviews. Clinical oncology, 2020-09, Vol.17 (9), p.525-526

2020

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Maternal plasma RNA sequencing for genome-wide transcriptomic profiling and identification of pregnancy-associated transcripts

Clinical chemistry (Baltimore, Md.), 2014-07, Vol.60 (7), p.954-962

2014

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Jagged Ends on Multinucleosomal Cell-Free DNA Serve as a Biomarker for Nuclease Activity and Systemic Lupus Erythematosus

Clinical chemistry (Baltimore, Md.), 2022-07, Vol.68 (7), p.917-926

2022

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Dynamic Changes of Post-Radiotherapy Plasma Epstein-Barr Virus DNA in a Randomized Trial of Adjuvant Chemotherapy Versus Observation in Nasopharyngeal Cancer

Clinical cancer research, 2021-05, Vol.27 (10), p.2827-2836

2021

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Circular RNAs as Urinary Biomarkers

Clinical chemistry (Baltimore, Md.), 2019-10, Vol.65 (10), p.1196-1198

2019

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Orientation-aware plasma cell-free DNA fragmentation analysis in open chromatin regions informs tissue of origin

Plasma DNA aberrations in systemic lupus erythematosus revealed by genomic and methylomic sequencing

Methy-Pipe: an integrated bioinformatics pipeline for whole genome bisulfite sequencing data analysis

Lengthening and shortening of plasma DNA in hepatocellular carcinoma patients

Cell-free DNA for Colorectal Cancer Screening

Enhanced cancer detection from cell-free DNA

Genome-wide detection of cytosine methylation by single molecule real-time sequencing

Noninvasive Prenatal Diagnosis of Congenital Adrenal Hyperplasia Using Cell-Free Fetal DNA in Maternal Plasma

Maternal plasma DNA sequencing reveals the genome-wide genetic and mutational profile of the fetus

Noninvasive detection of cancer-associated genome-wide hypomethylation and copy number aberrations by plasma DNA bisulfite sequencing

Size-based molecular diagnostics using plasma DNA for noninvasive prenatal testing

Sequencing-based counting and size profiling of plasma Epstein–Barr virus DNA enhance population screening of nasopharyngeal carcinoma

Single-Molecule Sequencing Enables Long Cell-Free DNA Detection and Direct Methylation Analysis for Cancer Patients

Prenatal Diagnosis Innovation: Genome Sequencing of Maternal Plasma

Comparison of Single Molecule, Real-Time Sequencing and Nanopore Sequencing for Analysis of the Size, End-Motif, and Tissue-of-Origin of Long Cell-Free DNA in Plasma

Noninvasive Prenatal Diagnosis of Monogenic Diseases by Digital Size Selection and Relative Mutation Dosage on DNA in Maternal Plasma

Methylation analysis of plasma DNA informs etiologies of Epstein-Barr virus-associated diseases

Jagged Ends of Urinary Cell-Free DNA: Characterization and Feasibility Assessment in Bladder Cancer Detection

Noninvasive detection of F8 int22h-related inversions and sequence variants in maternal plasma of hemophilia carriers

High-resolution analysis for urinary DNA jagged ends

Towards multi-cancer screening using liquid biopsies

Maternal plasma RNA sequencing for genome-wide transcriptomic profiling and identification of pregnancy-associated transcripts

Jagged Ends on Multinucleosomal Cell-Free DNA Serve as a Biomarker for Nuclease Activity and Systemic Lupus Erythematosus

Dynamic Changes of Post-Radiotherapy Plasma Epstein-Barr Virus DNA in a Randomized Trial of Adjuvant Chemotherapy Versus Observation in Nasopharyngeal Cancer

Circular RNAs as Urinary Biomarkers

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