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BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results

PloS one, 2018-10, Vol.13 (10), p.e0205286-e0205286

2018

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RMut: R package for a Boolean sensitivity analysis against various types of mutations

PloS one, 2019-03, Vol.14 (3), p.e0213736-e0213736

2019

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iPiG: integrating peptide spectrum matches into genome browser visualizations

PloS one, 2012-12, Vol.7 (12), p.e50246-e50246

2012

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TCW: transcriptome computational workbench

PloS one, 2013-07, Vol.8 (7), p.e69401-e69401

2013

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cyjShiny: A cytoscape.js R Shiny Widget for network visualization and analysis

PloS one, 2023-08, Vol.18 (8), p.e0285339-e0285339

2023

Volltextzugriff (PDF)

System biology and bioinformatics pipeline to identify comorbidities risk association: Neurodegenerative disorder case study

PloS one, 2021-05, Vol.16 (5), p.e0250660

2021

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Analysis of COVID-19 clinical trials: A data-driven, ontology-based, and natural language processing approach

PloS one, 2020-09, Vol.15 (9), p.e0239694-e0239694

2020

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Unique insights from ClinicalTrials.gov by mining protein mutations and RSids in addition to applying the Human Phenotype Ontology

PloS one, 2020-05, Vol.15 (5), p.e0233438-e0233438

2020

Volltextzugriff (PDF)

GIANT: a cytoscape plugin for modular networks

PloS one, 2014-10, Vol.9 (9), p.e105001-e105001

2014

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SynPAnal: software for rapid quantification of the density and intensity of protein puncta from fluorescence microscopy images of neurons

PloS one, 2014-12, Vol.9 (12), p.e115298

2014

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CyNetSVM: A Cytoscape App for Cancer Biomarker Identification Using Network Constrained Support Vector Machines

PloS one, 2017-01, Vol.12 (1), p.e0170482-e0170482

2017

Volltextzugriff (PDF)

A phenomenological model for predicting melting temperatures of DNA sequences

PloS one, 2010-08, Vol.5 (8), p.e12433-e12433

2010

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MUSTANG-MR structural sieving server: applications in protein structural analysis and crystallography

PloS one, 2010-04, Vol.5 (4), p.e10048-e10048

2010

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Efficient sample tracking with OpenLabFramework

Scientific reports, 2014-03, Vol.4 (1), p.4278-4278, Article 4278

2014

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NMRDSP: an accurate prediction of protein shape strings from NMR chemical shifts and sequence data

PloS one, 2013-12, Vol.8 (12), p.e83532-e83532

2013

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CytoKavosh: a cytoscape plug-in for finding network motifs in large biological networks

PloS one, 2012-08, Vol.7 (8), p.e43287-e43287

2012

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WImpiBLAST: web interface for mpiBLAST to help biologists perform large-scale annotation using high performance computing

PloS one, 2014-06, Vol.9 (6), p.e101144-e101144

2014

Volltextzugriff (PDF)

TreeVector: scalable, interactive, phylogenetic trees for the web

PloS one, 2010-01, Vol.5 (1), p.e8934-e8934

2010

Volltextzugriff (PDF)

Chromosome-level genome assembly of Korean native cattle and pangenome graph of 14 Bos taurus assemblies

Scientific data, 2023-08, Vol.10 (1), p.560-560, Article 560

2023

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The molecular interaction of six single-stranded DNA aptamers to cardiac troponin I revealed by docking and molecular dynamics simulation

PloS one, 2024-05, Vol.19 (5), p.e0302475

2024

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The assessment of molecular dynamics results of three-dimensional RNA aptamer structure prediction

PloS one, 2023-07, Vol.18 (7), p.e0288684-e0288684

2023

Volltextzugriff (PDF)

Coarse-grained molecular dynamics-guided immunoinformatics to explain the binder and non-binder classification of Cytotoxic T-cell epitope for SARS-CoV-2 peptide-based vaccine discovery

PloS one, 2023-10, Vol.18 (10), p.e0292156-e0292156

2023

Volltextzugriff (PDF)

De novo transcriptome assembly data for sengon (Falcataria moluccana) trees displaying resistance and susceptibility to boktor stem borers (Xystrocera festiva Pascoe)

BMC research notes, 2021-07, Vol.14 (1), p.261-261, Article 261

2021

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Neflamapimod induces vasodilation in resistance mesenteric arteries by inhibiting p38 MAPKα and downstream Hsp27 phosphorylation

Scientific reports, 2022-03, Vol.12 (1), p.4905-4905, Article 4905

2022

Volltextzugriff (PDF)

Droplet digital PCR versus real-time PCR for in-house validation of porcine detection and quantification protocol: An artificial recombinant plasmid approach

PloS one, 2023-07, Vol.18 (7), p.e0287712-e0287712

2023

Volltextzugriff (PDF)

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BlasterJS: A novel interactive JavaScript visualisation component for BLAST alignment results

RMut: R package for a Boolean sensitivity analysis against various types of mutations

iPiG: integrating peptide spectrum matches into genome browser visualizations

TCW: transcriptome computational workbench

cyjShiny: A cytoscape.js R Shiny Widget for network visualization and analysis

System biology and bioinformatics pipeline to identify comorbidities risk association: Neurodegenerative disorder case study

Analysis of COVID-19 clinical trials: A data-driven, ontology-based, and natural language processing approach

Unique insights from ClinicalTrials.gov by mining protein mutations and RSids in addition to applying the Human Phenotype Ontology

GIANT: a cytoscape plugin for modular networks

SynPAnal: software for rapid quantification of the density and intensity of protein puncta from fluorescence microscopy images of neurons

CyNetSVM: A Cytoscape App for Cancer Biomarker Identification Using Network Constrained Support Vector Machines

A phenomenological model for predicting melting temperatures of DNA sequences

MUSTANG-MR structural sieving server: applications in protein structural analysis and crystallography

Efficient sample tracking with OpenLabFramework

NMRDSP: an accurate prediction of protein shape strings from NMR chemical shifts and sequence data

CytoKavosh: a cytoscape plug-in for finding network motifs in large biological networks

WImpiBLAST: web interface for mpiBLAST to help biologists perform large-scale annotation using high performance computing

TreeVector: scalable, interactive, phylogenetic trees for the web

Chromosome-level genome assembly of Korean native cattle and pangenome graph of 14 Bos taurus assemblies

The molecular interaction of six single-stranded DNA aptamers to cardiac troponin I revealed by docking and molecular dynamics simulation

The assessment of molecular dynamics results of three-dimensional RNA aptamer structure prediction

Coarse-grained molecular dynamics-guided immunoinformatics to explain the binder and non-binder classification of Cytotoxic T-cell epitope for SARS-CoV-2 peptide-based vaccine discovery

De novo transcriptome assembly data for sengon (Falcataria moluccana) trees displaying resistance and susceptibility to boktor stem borers (Xystrocera festiva Pascoe)

Neflamapimod induces vasodilation in resistance mesenteric arteries by inhibiting p38 MAPKα and downstream Hsp27 phosphorylation

Droplet digital PCR versus real-time PCR for in-house validation of porcine detection and quantification protocol: An artificial recombinant plasmid approach

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