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CATH: an expanded resource to predict protein function through structure and sequence

Nucleic acids research, 2017-01, Vol.45 (D1), p.D289-D295

2017

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VarSite: Disease variants and protein structure

Protein science, 2020-01, Vol.29 (1), p.111-119

2020

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Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Biochemical journal, 2013-02, Vol.449 (3), p.581-594

2013

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Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (6), p.2223-2228

2014

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CATH: expanding the horizons of structure-based functional annotations for genome sequences

Nucleic acids research, 2019-01, Vol.47 (D1), p.D280-D284

2019

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Gene3D: expanding the utility of domain assignments

Nucleic acids research, 2016-01, Vol.44 (D1), p.D404-D409

2016

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Exploring the structure and function paradigm

Current opinion in structural biology, 2008-06, Vol.18 (3), p.394-402

2008

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Alpha Helices Are More Robust to Mutations than Beta Strands

PLoS computational biology, 2016-12, Vol.12 (12), p.e1005242-e1005242

2016

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Inferring function using patterns of native disorder in proteins

PLoS computational biology, 2007-08, Vol.3 (8), p.e162-e162

2007

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implications of alternative splicing in the ENCODE protein complement

Proceedings of the National Academy of Sciences - PNAS, 2007-03, Vol.104 (13), p.5495-5500

2007

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Quantitative profiling of protease specificity

PLoS computational biology, 2021-02, Vol.17 (2), p.e1008101-e1008101

2021

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CATHEDRAL: a fast and effective algorithm to predict folds and domain boundaries from multidomain protein structures

PLoS computational biology, 2007-11, Vol.3 (11), p.e232-e232

2007

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Structural and Energetic Characterization of the Ankyrin Repeat Protein Family

PLoS computational biology, 2015-12, Vol.11 (12), p.e1004659-e1004659

2015

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From structure to function: approaches and limitations

Nature structural & molecular biology, 2000-11, Vol.7 Suppl (11s), p.991-994

2000

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Detailed Analysis of Function Divergence in a Large and Diverse Domain Superfamily: Toward a Refined Protocol of Function Classification

Structure (London), 2010-11, Vol.18 (11), p.1522-1535

2010

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Exploiting structural classifications for function prediction: towards a domain grammar for protein function

Current opinion in structural biology, 2009-06, Vol.19 (3), p.349-356

2009

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Cancer-associated mutations are preferentially distributed in protein kinase functional sites

Proteins, structure, function, and bioinformatics, 2009-12, Vol.77 (4), p.892-903

2009

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Diversity in protein domain superfamilies

Current opinion in genetics & development, 2015-12, Vol.35, p.40-49

2015

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Large-Scale Analysis Exploring Evolution of Catalytic Machineries and Mechanisms in Enzyme Superfamilies

Journal of molecular biology, 2016-01, Vol.428 (2), p.253-267

2016

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Protein families and their evolution-a structural perspective

Annual review of biochemistry, 2005-01, Vol.74 (1), p.867-900

2005

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The CATH classification revisited--architectures reviewed and new ways to characterize structural divergence in superfamilies

Nucleic acids research, 2009-01, Vol.37 (Database issue), p.D310-D314

2009

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Characterization of pathogenic germline mutations in human protein kinases

BMC bioinformatics, 2011-07, Vol.12 Suppl 4 (S4), p.S1-S1, Article S1

2011

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CATH-Gene3D: Generation of the Resource and Its Use in Obtaining Structural and Functional Annotations for Protein Sequences

Methods in molecular biology (Clifton, N.J.), 2017, Vol.1558, p.79

2017

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Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis

Nucleic acids research, 2014-01, Vol.42 (Database issue), p.D240-D245

2014

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Gene3D: modelling protein structure, function and evolution

Nucleic acids research, 2006-01, Vol.34 (Database issue), p.D281-D284

2006

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CATH: an expanded resource to predict protein function through structure and sequence

VarSite: Disease variants and protein structure

Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

CATH: expanding the horizons of structure-based functional annotations for genome sequences

Gene3D: expanding the utility of domain assignments

Exploring the structure and function paradigm

Alpha Helices Are More Robust to Mutations than Beta Strands

Inferring function using patterns of native disorder in proteins

implications of alternative splicing in the ENCODE protein complement

Quantitative profiling of protease specificity

CATHEDRAL: a fast and effective algorithm to predict folds and domain boundaries from multidomain protein structures

Structural and Energetic Characterization of the Ankyrin Repeat Protein Family

From structure to function: approaches and limitations

Detailed Analysis of Function Divergence in a Large and Diverse Domain Superfamily: Toward a Refined Protocol of Function Classification

Exploiting structural classifications for function prediction: towards a domain grammar for protein function

Cancer-associated mutations are preferentially distributed in protein kinase functional sites

Diversity in protein domain superfamilies

Large-Scale Analysis Exploring Evolution of Catalytic Machineries and Mechanisms in Enzyme Superfamilies

Protein families and their evolution-a structural perspective

The CATH classification revisited--architectures reviewed and new ways to characterize structural divergence in superfamilies

Characterization of pathogenic germline mutations in human protein kinases

CATH-Gene3D: Generation of the Resource and Its Use in Obtaining Structural and Functional Annotations for Protein Sequences

Gene3D: Multi-domain annotations for protein sequence and comparative genome analysis

Gene3D: modelling protein structure, function and evolution

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