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Structure–function relationships explain CTCF zinc finger mutation phenotypes in cancer

Cellular and molecular life sciences : CMLS, 2021-12, Vol.78 (23), p.7519-7536

2021

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Transcription-coupled structural dynamics of topologically associating domains regulate replication origin efficiency

Genome Biology, 2021-07, Vol.22 (1), p.206-206, Article 206

2021

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Long non-coding RNA MIR22HG suppresses the chondrogenic differentiation of human adipose-derived stem cells by interacting with CTCF to upregulate CRLF1

Functional & integrative genomics, 2023-12, Vol.23 (4), p.329-329, Article 329

2023

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The structural and functional roles of CTCF in the regulation of cell type-specific and human disease-associated super-enhancers

Genes & Genomics, 2019, 41(3), , pp.257-265

Shin, Ha Youn

2019

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DeTOKI identifies and characterizes the dynamics of chromatin TAD-like domains in a single cell

Genome Biology, 2021-07, Vol.22 (1), p.217-217, Article 217

2021

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CTCF maintains regulatory homeostasis of cancer pathways

Genome Biology, 2018-08, Vol.19 (1), p.106-106, Article 106

2018

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Epigenetic silencing of miR-181c by DNA methylation in glioblastoma cell lines

BMC cancer, 2016-03, Vol.16 (228), p.226-226, Article 226

2016

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Long Non-coding RNA ANRIL in Gene Regulation and Its Duality in Atherosclerosis

Current medical science, 2017-12, Vol.37 (6), p.816-822

2017

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Characterization of GJB2 cis-regulatory elements in the DFNB1 locus

Human genetics, 2019-12, Vol.138 (11-12), p.1275-1286

2019

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Targeting CTCFL/BORIS for the immunotherapy of cancer

Cancer Immunology, Immunotherapy, 2018-12, Vol.67 (12), p.1955-1965

Loukinov, Dmitri

2018

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CRISPR/Cas9 offers a new tool for studying the role of chromatin architecture in disease pathogenesis

Genome Biology, 2018-11, Vol.19 (1), p.185-185, Article 185

2018

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Altered expression of fragile X mental retardation-1 (FMR1) in the thymus in autoimmune myasthenia gravis

Journal of neuroinflammation, 2021-11, Vol.18 (1), p.270-270, Article 270

2021

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Conditional knock out of transcription factor CTCF in excitatory neurons induces cognitive deficiency

Molecular brain, 2021-01, Vol.14 (1), p.1-1, Article 1

2021

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Architectural proteins for the formation and maintenance of the 3D genome

Science China. Life sciences, 2020-06, Vol.63 (6), p.795-810

2020

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The CTCF/LncRNA‐PACERR complex recruits E1A binding protein p300 to induce pro‐tumour macrophages in pancreatic ductal adenocarcinoma via directly regulating PTGS2 expression

Clinical and translational medicine, 2022-02, Vol.12 (2), p.e654-n/a

2022

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NF-kappa B mediated up-regulation of CCCTC-binding factor in pediatric acute lymphoblastic leukemia

Molecular cancer, 2014-01, Vol.13 (1), p.5-5, Article 5

2014

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Developing in 3D: the role of CTCF in cell differentiation

Development (Cambridge), 2018-03, Vol.145 (6), p.dev137729-dev137729

2018

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Bipartite structure of the inactive mouse X chromosome

Genome Biology, 2015-08, Vol.16 (1), p.152-152, Article 152

2015

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CCCTC-binding factor controls its own nuclear transport via regulating the expression of importin 13

Molecules and Cells, 2013, 35(5), , pp.388-395

2013

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HiCcompare: an R-package for joint normalization and comparison of HI-C datasets

BMC bioinformatics, 2018-07, Vol.19 (1), p.279-279, Article 279

2018

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ChIPr: accurate prediction of cohesin-mediated 3D genome organization from 2D chromatin features

Genome Biology, 2024-01, Vol.25 (1), p.15-15, Article 15

2024

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CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops

Genome Biology, 2018-10, Vol.19 (1), p.160-17, Article 160

2018

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Auxin-inducible degron 2 system deciphers functions of CTCF domains in transcriptional regulation

Genome Biology, 2023-01, Vol.24 (1), p.14-14, Article 14

2023

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Spatial chromatin architecture alteration by structural variations in human genomes at the population scale

Genome Biology, 2019-07, Vol.20 (1), p.148-148, Article 148

2019

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DeepMILO: a deep learning approach to predict the impact of non-coding sequence variants on 3D chromatin structure

Genome Biology, 2020-03, Vol.21 (1), p.79-79, Article 79

2020

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Structure–function relationships explain CTCF zinc finger mutation phenotypes in cancer

Transcription-coupled structural dynamics of topologically associating domains regulate replication origin efficiency

Long non-coding RNA MIR22HG suppresses the chondrogenic differentiation of human adipose-derived stem cells by interacting with CTCF to upregulate CRLF1

The structural and functional roles of CTCF in the regulation of cell type-specific and human disease-associated super-enhancers

DeTOKI identifies and characterizes the dynamics of chromatin TAD-like domains in a single cell

CTCF maintains regulatory homeostasis of cancer pathways

Epigenetic silencing of miR-181c by DNA methylation in glioblastoma cell lines

Long Non-coding RNA ANRIL in Gene Regulation and Its Duality in Atherosclerosis

Characterization of GJB2 cis-regulatory elements in the DFNB1 locus

Targeting CTCFL/BORIS for the immunotherapy of cancer

CRISPR/Cas9 offers a new tool for studying the role of chromatin architecture in disease pathogenesis

Altered expression of fragile X mental retardation-1 (FMR1) in the thymus in autoimmune myasthenia gravis

Conditional knock out of transcription factor CTCF in excitatory neurons induces cognitive deficiency

Architectural proteins for the formation and maintenance of the 3D genome

The CTCF/LncRNA‐PACERR complex recruits E1A binding protein p300 to induce pro‐tumour macrophages in pancreatic ductal adenocarcinoma via directly regulating PTGS2 expression

NF-kappa B mediated up-regulation of CCCTC-binding factor in pediatric acute lymphoblastic leukemia

Developing in 3D: the role of CTCF in cell differentiation

Bipartite structure of the inactive mouse X chromosome

CCCTC-binding factor controls its own nuclear transport via regulating the expression of importin 13

HiCcompare: an R-package for joint normalization and comparison of HI-C datasets

ChIPr: accurate prediction of cohesin-mediated 3D genome organization from 2D chromatin features

CRISPR-mediated deletion of prostate cancer risk-associated CTCF loop anchors identifies repressive chromatin loops

Auxin-inducible degron 2 system deciphers functions of CTCF domains in transcriptional regulation

Spatial chromatin architecture alteration by structural variations in human genomes at the population scale

DeepMILO: a deep learning approach to predict the impact of non-coding sequence variants on 3D chromatin structure

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