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A consensus method for the prediction of 'aggregation-prone' peptides in globular proteins

PloS one, 2013-01, Vol.8 (1), p.e54175-e54175

2013

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Linear B-Cell Epitope Prediction for In Silico Vaccine Design: A Performance Review of Methods Available via Command-Line Interface

International journal of molecular sciences, 2021-03, Vol.22 (6), p.3210

2021

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The SAH7 Homologue of the Allergen Ole e 1 Interacts with the Putative Stress Sensor SBP1 (Selenium-Binding Protein 1) in Arabidopsis thaliana

International journal of molecular sciences, 2023-02, Vol.24 (4), p.3580

2023

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Extended Human G‑Protein Coupled Receptor Network: Cell-Type-Specific Analysis of G‑Protein Coupled Receptor Signaling Pathways

Journal of proteome research, 2020-01, Vol.19 (1), p.511-524

2020

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The amyloid interactome: Exploring protein aggregation

PloS one, 2017-03, Vol.12 (3), p.e0173163-e0173163

2017

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Exploring the conservation of Alzheimer-related pathways between H. sapiens and C. elegans: a network alignment approach

Scientific reports, 2021-02, Vol.11 (1), p.4572-4572, Article 4572

2021

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Identification of an amyloid fibril forming segment of human Pmel17 repeat domain (RPT domain)

Biopolymers, 2016-01, Vol.106 (1), p.133-139

2016

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Structural analysis of peptide-analogues of human Zona Pellucida ZP1 protein with amyloidogenic properties: insights into mammalian Zona Pellucida formation

PloS one, 2013-09, Vol.8 (9), p.e73258-e73258

2013

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Approaches in Gene Coexpression Analysis in Eukaryotes

Biology (Basel, Switzerland), 2022-07, Vol.11 (7), p.1019

2022

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Proteome-Wide Detection and Annotation of Receptor Tyrosine Kinases (RTKs): RTK-PRED and the TyReK Database

Biomolecules (Basel, Switzerland), 2023-02, Vol.13 (2), p.270

2023

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SARS-CoV-2 Neutralizing Antibodies Kinetics Postvaccination in Cancer Patients under Treatment with Immune Checkpoint Inhibition

Cancers, 2022-06, Vol.14 (11), p.2796

2022

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Hidden Aggregation Hot-Spots on Human Apolipoprotein E: A Structural Study

International journal of molecular sciences, 2019-05, Vol.20 (9), p.2274

2019

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NucEnvDB: A Database of Nuclear Envelope Proteins and Their Interactions

Membranes (Basel), 2023-01, Vol.13 (1), p.62

2023

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Bacterial Lectin FimH and Its Aggregation Hot-Spots: An Alternative Strategy against Uropathogenic Escherichia coli

Pharmaceutics, 2023-03, Vol.15 (3), p.1018

2023

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Beneficial Effects of Sideritis clandestina Extracts and Sideridiol against Amyloid β Toxicity

Antioxidants, 2024-02, Vol.13 (3), p.261

2024

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Arabidopsis thaliana Plant Natriuretic Peptide Active Domain Forms Amyloid-like Fibrils in a pH-Dependent Manner

Plants (Basel), 2021-12, Vol.11 (1), p.9

2021

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SARS-CoV-2 Amino Acid Mutations Detection in Greek Patients Infected in the First Wave of the Pandemic

Microorganisms (Basel), 2022-07, Vol.10 (7), p.1430

2022

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HGCA2.0: An RNA-Seq Based Webtool for Gene Coexpression Analysis in Homo sapiens

Cells (Basel, Switzerland), 2023-01, Vol.12 (3), p.388

2023

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A Multilevel Study of Eupatorin and Scutellarein as Anti-Amyloid Agents in Alzheimer's Disease

Biomedicines, 2023-05, Vol.11 (5), p.1357

2023

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Consensus prediction of amyloidogenic determinants in amyloid fibril-forming proteins

International journal of biological macromolecules, 2007-08, Vol.41 (3), p.295-300

2007

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Targeting of copper-trafficking chaperones causes gene-specific systemic pathology in Drosophila melanogaster : prospective expansion of mutational landscapes that regulate tumor resistance to cisplatin

Biology open, 2019-10, Vol.8 (10)

2019

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PerMemDB: A database for eukaryotic peripheral membrane proteins

Biochimica et biophysica acta. Biomembranes, 2020-02, Vol.1862 (2), p.183076-183076, Article 183076

2020

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The gram‐negative outer membrane modeler: Automated building of lipopolysaccharide‐rich bacterial outer membranes in four force fields

Journal of computational chemistry, 2019-07, Vol.40 (18), p.1727-1734

2019

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Hexapeptide Tandem Repeats Dictate the Formation of Silkmoth Chorion, a Natural Protective Amyloid

Journal of molecular biology, 2018-10, Vol.430 (20), p.3774-3783

2018

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LiGIoNs: A computational method for the detection and classification of ligand-gated ion channels

Biochimica et biophysica acta. Biomembranes, 2022-09, Vol.1864 (9), p.183956-183956, Article 183956

2022

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A consensus method for the prediction of 'aggregation-prone' peptides in globular proteins

Linear B-Cell Epitope Prediction for In Silico Vaccine Design: A Performance Review of Methods Available via Command-Line Interface

The SAH7 Homologue of the Allergen Ole e 1 Interacts with the Putative Stress Sensor SBP1 (Selenium-Binding Protein 1) in Arabidopsis thaliana

Extended Human G‑Protein Coupled Receptor Network: Cell-Type-Specific Analysis of G‑Protein Coupled Receptor Signaling Pathways

The amyloid interactome: Exploring protein aggregation

Exploring the conservation of Alzheimer-related pathways between H. sapiens and C. elegans: a network alignment approach

Identification of an amyloid fibril forming segment of human Pmel17 repeat domain (RPT domain)

Structural analysis of peptide-analogues of human Zona Pellucida ZP1 protein with amyloidogenic properties: insights into mammalian Zona Pellucida formation

Approaches in Gene Coexpression Analysis in Eukaryotes

Proteome-Wide Detection and Annotation of Receptor Tyrosine Kinases (RTKs): RTK-PRED and the TyReK Database

SARS-CoV-2 Neutralizing Antibodies Kinetics Postvaccination in Cancer Patients under Treatment with Immune Checkpoint Inhibition

Hidden Aggregation Hot-Spots on Human Apolipoprotein E: A Structural Study

NucEnvDB: A Database of Nuclear Envelope Proteins and Their Interactions

Bacterial Lectin FimH and Its Aggregation Hot-Spots: An Alternative Strategy against Uropathogenic Escherichia coli

Beneficial Effects of Sideritis clandestina Extracts and Sideridiol against Amyloid β Toxicity

Arabidopsis thaliana Plant Natriuretic Peptide Active Domain Forms Amyloid-like Fibrils in a pH-Dependent Manner

SARS-CoV-2 Amino Acid Mutations Detection in Greek Patients Infected in the First Wave of the Pandemic

HGCA2.0: An RNA-Seq Based Webtool for Gene Coexpression Analysis in Homo sapiens

A Multilevel Study of Eupatorin and Scutellarein as Anti-Amyloid Agents in Alzheimer's Disease

Consensus prediction of amyloidogenic determinants in amyloid fibril-forming proteins

Targeting of copper-trafficking chaperones causes gene-specific systemic pathology in Drosophila melanogaster : prospective expansion of mutational landscapes that regulate tumor resistance to cisplatin

PerMemDB: A database for eukaryotic peripheral membrane proteins

The gram‐negative outer membrane modeler: Automated building of lipopolysaccharide‐rich bacterial outer membranes in four force fields

Hexapeptide Tandem Repeats Dictate the Formation of Silkmoth Chorion, a Natural Protective Amyloid

LiGIoNs: A computational method for the detection and classification of ligand-gated ion channels

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