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Conserved regulatory state expression controlled by divergent developmental gene regulatory networks in echinoids

Development (Cambridge), 2018-12, Vol.145 (24)

2018

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Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis

Genome research, 2012-10, Vol.22 (10), p.2079-2087

2012

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A comprehensive analysis of Delta signaling in pre-gastrular sea urchin embryos

Developmental biology, 2012-04, Vol.364 (1), p.77-87

2012

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Cis-regulatory logic driving glial cells missing: Self-sustaining circuitry in later embryogenesis

Developmental biology, 2012-04, Vol.364 (2), p.259-267

2012

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Diversification of oral and aboral mesodermal regulatory states in pregastrular sea urchin embryos

Developmental biology, 2013-03, Vol.375 (1), p.92-104

2013

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Implications of Developmental Gene Regulatory Networks Inside and Outside Developmental Biology

Current topics in developmental biology, 2016-01, Vol.117, p.237-251

2016

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cis-regulatory processing of Notch signaling input to the sea urchin glial cells missing gene during mesoderm specification

Developmental biology, 2006-09, Vol.297 (2), p.587-602

2006

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New regulatory circuit controlling spatial and temporal gene expression in the sea urchin embryo oral ectoderm GRN

Developmental biology, 2013-10, Vol.382 (1), p.268-279

2013

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Sea urchin Forkhead gene family: Phylogeny and embryonic expression

Developmental biology, 2006-12, Vol.300 (1), p.49-62

2006

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Genome-wide assessment of differential effector gene use in embryogenesis

Development (Cambridge), 2015-11, Vol.142 (22), p.3892-3901

2015

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Modeling transcriptional regulatory networks

BioEssays, 2002-12, Vol.24 (12), p.1118-1129

2002

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Direct and indirect control of oral ectoderm regulatory gene expression by Nodal signaling in the sea urchin embryo

Developmental biology, 2012-09, Vol.369 (2), p.377-385

2012

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Reorganization of sea urchin gene regulatory networks at least 268 million years ago as revealed by oldest fossil cidaroid echinoid

Scientific reports, 2015-10, Vol.5 (1), p.15541-15541, Article 15541

2015

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Genomic characterization of Gli-activator targets in sonic hedgehog-mediated neural patterning

Development (Cambridge), 2007-05, Vol.134 (10), p.1977-1989

2007

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General approach for in vivo recovery of cell type-specific effector gene sets

Genome research, 2014-05, Vol.24 (5), p.860-868

2014

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Computational representation of developmental genetic regulatory networks

Developmental biology, 2005-07, Vol.283 (1), p.1-16

2005

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Sequential Response to Multiple Developmental Network Circuits Encoded in an Intronic cis-Regulatory Module of Sea Urchin hox11/13b

Cell reports (Cambridge), 2017-04, Vol.19 (2), p.364-374

2017

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Gene regulatory control in the sea urchin aboral ectoderm: Spatial initiation, signaling inputs, and cell fate lockdown

Developmental biology, 2013-02, Vol.374 (1), p.245-254

2013

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High accuracy, high-resolution prevalence measurement for the majority of locally expressed regulatory genes in early sea urchin development

Gene Expression Patterns, 2010-06, Vol.10 (4), p.177-184

2010

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The last common bilaterian ancestor

Development (Cambridge), 2002-07, Vol.129 (13), p.3021-3032

2002

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A perturbation model of the gene regulatory network for oral and aboral ectoderm specification in the sea urchin embryo

Developmental biology, 2009-05, Vol.329 (2), p.410-421

2009

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Repression of mesodermal fate by foxa, a key endoderm regulator of the sea urchin embryo

Development (Cambridge), 2006-11, Vol.133 (21), p.4173-4181

2006

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Gene regulatory network controlling embryonic specification in the sea urchin

Current opinion in genetics & development, 2004-08, Vol.14 (4), p.351-360

2004

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Gene families encoding transcription factors expressed in early development of Strongylocentrotus purpuratus

Developmental biology, 2006-12, Vol.300 (1), p.90-107

2006

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cis-Regulatory control of cyclophilin, a member of the ETS-DRI skeletogenic gene battery in the sea urchin embryo

Developmental biology, 2006-05, Vol.293 (2), p.555-564

2006

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Conserved regulatory state expression controlled by divergent developmental gene regulatory networks in echinoids

Gene structure in the sea urchin Strongylocentrotus purpuratus based on transcriptome analysis

A comprehensive analysis of Delta signaling in pre-gastrular sea urchin embryos

Cis-regulatory logic driving glial cells missing: Self-sustaining circuitry in later embryogenesis

Diversification of oral and aboral mesodermal regulatory states in pregastrular sea urchin embryos

Implications of Developmental Gene Regulatory Networks Inside and Outside Developmental Biology

cis-regulatory processing of Notch signaling input to the sea urchin glial cells missing gene during mesoderm specification

New regulatory circuit controlling spatial and temporal gene expression in the sea urchin embryo oral ectoderm GRN

Sea urchin Forkhead gene family: Phylogeny and embryonic expression

Genome-wide assessment of differential effector gene use in embryogenesis

Modeling transcriptional regulatory networks

Direct and indirect control of oral ectoderm regulatory gene expression by Nodal signaling in the sea urchin embryo

Reorganization of sea urchin gene regulatory networks at least 268 million years ago as revealed by oldest fossil cidaroid echinoid

Genomic characterization of Gli-activator targets in sonic hedgehog-mediated neural patterning

General approach for in vivo recovery of cell type-specific effector gene sets

Computational representation of developmental genetic regulatory networks

Sequential Response to Multiple Developmental Network Circuits Encoded in an Intronic cis-Regulatory Module of Sea Urchin hox11/13b

Gene regulatory control in the sea urchin aboral ectoderm: Spatial initiation, signaling inputs, and cell fate lockdown

High accuracy, high-resolution prevalence measurement for the majority of locally expressed regulatory genes in early sea urchin development

The last common bilaterian ancestor

A perturbation model of the gene regulatory network for oral and aboral ectoderm specification in the sea urchin embryo

Repression of mesodermal fate by foxa, a key endoderm regulator of the sea urchin embryo

Gene regulatory network controlling embryonic specification in the sea urchin

Gene families encoding transcription factors expressed in early development of Strongylocentrotus purpuratus

cis-Regulatory control of cyclophilin, a member of the ETS-DRI skeletogenic gene battery in the sea urchin embryo

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