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Impact of molecular weight and chain rigidity on the endocytosis and anti-tumor activity of seleno-lentinan

Journal of future foods, 2025-07, Vol.5 (4), p.419-427

2025

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Collapse-reexpansion conformational transition of alginate under non-specific ion conditions

Food hydrocolloids, 2025-03, Vol.160, p.110744, Article 110744

2025

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Unveiling the conformational landscape of tizanidine and its effects on selective nucleation: Enabling controlled manipulation of polymorphs and solvates

Separation and purification technology, 2025-02, Vol.354, p.128827, Article 128827

2025

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gRNAde: A Geometric Deep Learning Pipeline for 3D RNA Inverse Design

Methods in molecular biology (Clifton, N.J.), 2025, Vol.2847, p.121

2025

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Substitution effect and charge transport properties in organic field-effect transistors (OFETs) of simply functionalized carbazole derivatives

Journal of solid state chemistry, 2025-01, Vol.341, p.125093, Article 125093

2025

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Generating Artificial Ribozymes Using Sparse Coevolutionary Models

Methods in molecular biology (Clifton, N.J.), 2025, Vol.2847, p.217

2025

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Structural and biochemical analysis of ligand binding in yeast Niemann-Pick type C1-related protein

Life science alliance, 2025-01, Vol.8 (1), p.e202402990

2025

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Toward Increasing the Credibility of RNA Design

Methods in molecular biology (Clifton, N.J.), 2025, Vol.2847, p.137

2025

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3D-Based RNA Function Prediction Tools in rnaglib

Methods in molecular biology (Clifton, N.J.), 2025, Vol.2847, p.153

2025

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Generative Modeling of RNA Sequence Families with Restricted Boltzmann Machines

Methods in molecular biology (Clifton, N.J.), 2025, Vol.2847, p.163

Fernandez-de-Cossio-Diaz, Jorge

2025

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Circular at the very beginning: on the initial genomes in the RNA world

RNA biology, 2024-12, Vol.21 (1), p.17-31

2024

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The myriad roles of RNA structure in the flavivirus life cycle

RNA biology, 2024-12, Vol.21 (1), p.14-30

2024

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Structures and functions of short argonautes

RNA biology, 2024-12, Vol.21 (1), p.1-7

2024

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Poly(G) 7 box: a functional element of mammalian 18S rRNA involved in translation

RNA biology, 2024-12, Vol.21 (1), p.8-18

2024

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Regulation and mechanisms of action of RNA helicases

RNA biology, 2024-12, Vol.21 (1), p.24-38

2024

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Unraveling the impact of ORF3a Q57H mutation on SARS-CoV-2: insights from molecular dynamics

Journal of biomolecular structure & dynamics, 2024-12, Vol.42 (18), p.9753-9766

2024

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Identification of molecular signatures and molecular dynamics simulation of highly deleterious missense variants of key autophagy regulator beclin 1: a computational based approach

Journal of biomolecular structure & dynamics, 2024-12, Vol.42 (18), p.9691-9704

2024

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Hemoglobin targeting potential of aminocarb pesticide: Investigation into dynamics, conformational stability, and energetics in solvent environment

Biochemical and biophysical research communications, 2024-12, Vol.736, p.150896, Article 150896

2024

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Normal mode analysis and comparative study of intrinsic dynamics of alcohol oxidase enzymes from GMC protein family

Journal of biomolecular structure & dynamics, 2024-12, Vol.42 (19), p.10075-10090

2024

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Impact of Fe + 2 ions on structural integrity of A0A6P1CI42_RHITR NifA protein from Rhizobium tropici strain CIAT 899

Journal of biomolecular structure & dynamics, 2024-12, Vol.42 (19), p.10429-10438

2024

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Structure of amino acid sequence-reversed wtRop protein: insights from atomistic molecular dynamics simulations

Journal of biomolecular structure & dynamics, 2024-12, Vol.42 (19), p.9842-9856

2024

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In silico prediction of mutation sites for anthranilate synthase from Serratia marcesens to deregulate tryptophan feedback inhibition

Journal of biomolecular structure & dynamics, 2024-12, Vol.42 (19), p.9908-9918

2024

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Global shape of SvGT, a metal-dependent bacteriocin modifying S/O-HexNActransferase from actinobacteria: c -terminal dimerization modulates the function of this GT

Journal of biomolecular structure & dynamics, 2024-12, Vol.42 (19), p.10150-10164

2024

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Interactions and conformational changes of annexin A2/p11 heterotetramer models on a membrane: a molecular dynamics study

Journal of biomolecular structure & dynamics, 2024-12, Vol.42 (19), p.10342-10351

2024

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Engineering the native ensemble to tune protein function: Diverse mutational strategies and interlinked molecular mechanisms

Current opinion in structural biology, 2024-12, Vol.89, p.102940, Article 102940

2024

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Impact of molecular weight and chain rigidity on the endocytosis and anti-tumor activity of seleno-lentinan

Collapse-reexpansion conformational transition of alginate under non-specific ion conditions

Unveiling the conformational landscape of tizanidine and its effects on selective nucleation: Enabling controlled manipulation of polymorphs and solvates

gRNAde: A Geometric Deep Learning Pipeline for 3D RNA Inverse Design

Substitution effect and charge transport properties in organic field-effect transistors (OFETs) of simply functionalized carbazole derivatives

Generating Artificial Ribozymes Using Sparse Coevolutionary Models

Structural and biochemical analysis of ligand binding in yeast Niemann-Pick type C1-related protein

Toward Increasing the Credibility of RNA Design

3D-Based RNA Function Prediction Tools in rnaglib

Generative Modeling of RNA Sequence Families with Restricted Boltzmann Machines

Circular at the very beginning: on the initial genomes in the RNA world

The myriad roles of RNA structure in the flavivirus life cycle

Structures and functions of short argonautes

Poly(G) 7 box: a functional element of mammalian 18S rRNA involved in translation

Regulation and mechanisms of action of RNA helicases

Unraveling the impact of ORF3a Q57H mutation on SARS-CoV-2: insights from molecular dynamics

Identification of molecular signatures and molecular dynamics simulation of highly deleterious missense variants of key autophagy regulator beclin 1: a computational based approach

Hemoglobin targeting potential of aminocarb pesticide: Investigation into dynamics, conformational stability, and energetics in solvent environment

Normal mode analysis and comparative study of intrinsic dynamics of alcohol oxidase enzymes from GMC protein family

Impact of Fe + 2 ions on structural integrity of A0A6P1CI42_RHITR NifA protein from Rhizobium tropici strain CIAT 899

Structure of amino acid sequence-reversed wtRop protein: insights from atomistic molecular dynamics simulations

In silico prediction of mutation sites for anthranilate synthase from Serratia marcesens to deregulate tryptophan feedback inhibition

Global shape of SvGT, a metal-dependent bacteriocin modifying S/O-HexNActransferase from actinobacteria: c -terminal dimerization modulates the function of this GT

Interactions and conformational changes of annexin A2/p11 heterotetramer models on a membrane: a molecular dynamics study

Engineering the native ensemble to tune protein function: Diverse mutational strategies and interlinked molecular mechanisms

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