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Human_SNP_TATAdb: a database of SNPs that statistically significantly change the affinity of the TATA-binding protein to human gene promoters: genome-wide analysis and use cases

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2023-12, Vol.27 (7), p.728-736

2023

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On a Numerical Model of a Circadian Oscillator

Numerical analysis and applications, 2022-09, Vol.15 (3), p.187-196

2022

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International Conference «Marchuk Scientific Readings 2021» (MSR-2021)

Journal of physics. Conference series, 2021-11, Vol.2099 (1), p.11001

2021

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Erratum to: On a Numerical Model of a Circadian Oscillator

Numerical analysis and applications, 2022, Vol.15 (4), p.379-379

2022

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On Conditions for the Existence of Cycles in Two Models of a Circadian Oscillator of Mammals

Journal of applied and industrial mathematics, 2021, Vol.15 (4), p.597-608

2021

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Ontologies in bioinformatics and systems biology

Russian journal of genetics. Applied research, 2016-11, Vol.6 (7), p.749-758

2016

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Prioritization of genes associated with the pathogenesis of leukosis in cattle

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2019-01, Vol.22 (8), p.1063-1069

2019

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Detection and analysis of dynamic patterns of diurnal expression of mammalian genes

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2019-01, Vol.22 (8), p.1055-1062

2019

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Computational model of circadian oscillator in mammals: Interaction with NAD+/SIRT1 system and age-related changes in the expression of circadian oscillator genes

Russian journal of genetics. Applied research, 2017-07, Vol.7 (5), p.565-573

2017

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Computational model for mammalian circadian oscillator: interacting with NAD+/SIRT1 pathway and age-related changes in gene expression of circadian oscillator

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2017-02, Vol.20 (6), p.848-856

2017

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Ontologies in bioinformatics and systems biology

Vavilov Journal of Genetics and Breeding, 2016-01, Vol.19 (6), p.652-660

2016

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Effects of SNPs in the positioning regions of RNA polymerase II on the TBP/promoter affinity in genes of the human circadian clock

Russian journal of genetics. Applied research, 2016-11, Vol.6 (7), p.759-770

2016

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Biomedical and candidate SNP markers of chronopathologies can significantly change the affinity of the ТАТА-binding protein to the promoters of human genes

Russian journal of genetics. Applied research, 2016-11, Vol.6 (7), p.738-748

2016

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Biomedical and candidate SN P markers of chronopathologies can significantly change affinity of ТАТА -binding protein for human gene promoters

Vavilov Journal of Genetics and Breeding, 2016-01, Vol.19 (6), p.691-698

2016

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The effects of SN Ps in the regions of positioning RNA polymerase II on the TBP/promoter affinity in the genes of human circadian clock

Vavilov Journal of Genetics and Breeding, 2016-01, Vol.19 (6), p.682-690

2016

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RatDEGdb: a knowledge base of differentially expressed genes in the rat as a model object in biomedical research

Vavilovskiĭ zhurnal genetiki i selekt͡s︡ii, 2023-12, Vol.27 (7), p.794-806

2023

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TRRD: Technology for extraction, storage, and use of knowledge about the structural-functional organization of the transcriptional regulatory regions in the eukaryotic genes

Intelligent data analysis, 2008-01, Vol.12 (5), p.443-461

2008

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Cytoscape Plugin for Reconstruction of Structural Random Graph Models of Biological Networks

Vestnik NSU. Series: Information Technologies, 2018, Vol.16 (3), p.37-50

2018

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The mammalian circadian clock: Gene regulatory network and computer analysis

Russian journal of genetics. Applied research, 2015-07, Vol.5 (4), p.354-362

2015

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Visualization of chromosome-specific DNA Sequences by fluorescence in situ hybridization of microdissection DNA probes with metaphase chromosomes

Russian journal of genetics. Applied research, 2012-11, Vol.2 (6), p.413-420

2012

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Relatively conserved common short sequences in transcription factor binding sites and miRNA

Russian journal of genetics. Applied research, 2012-05, Vol.2 (3), p.238-242

2012

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Routes of nanoparticle uptake into mammalian organisms, their biocompatibility and cellular effects

Biology bulletin reviews, 2012-07, Vol.2 (4), p.279-289

2012

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Program complex SNP-MED for analysis of single-nucleotide polymorphism (SNP) effects on the function of genes associated with socially significant diseases

Russian journal of genetics. Applied research, 2014, Vol.4 (3), p.159-167

2014

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Computational modeling of the cell-autonomous mammalian circadian oscillator

BMC systems biology, 2017-02, Vol.11 (Suppl 1), p.27-42

2017

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Human_SNP_TATAdb: a database of SNPs that statistically significantly change the affinity of the TATA-binding protein to human gene promoters: genome-wide analysis and use cases

On a Numerical Model of a Circadian Oscillator

International Conference «Marchuk Scientific Readings 2021» (MSR-2021)

Erratum to: On a Numerical Model of a Circadian Oscillator

On Conditions for the Existence of Cycles in Two Models of a Circadian Oscillator of Mammals

Ontologies in bioinformatics and systems biology

Prioritization of genes associated with the pathogenesis of leukosis in cattle

Detection and analysis of dynamic patterns of diurnal expression of mammalian genes

Computational model of circadian oscillator in mammals: Interaction with NAD+/SIRT1 system and age-related changes in the expression of circadian oscillator genes

Computational model for mammalian circadian oscillator: interacting with NAD+/SIRT1 pathway and age-related changes in gene expression of circadian oscillator

Ontologies in bioinformatics and systems biology

Effects of SNPs in the positioning regions of RNA polymerase II on the TBP/promoter affinity in genes of the human circadian clock

Biomedical and candidate SNP markers of chronopathologies can significantly change the affinity of the ТАТА-binding protein to the promoters of human genes

Biomedical and candidate SN P markers of chronopathologies can significantly change affinity of ТАТА -binding protein for human gene promoters

The effects of SN Ps in the regions of positioning RNA polymerase II on the TBP/promoter affinity in the genes of human circadian clock

RatDEGdb: a knowledge base of differentially expressed genes in the rat as a model object in biomedical research

TRRD: Technology for extraction, storage, and use of knowledge about the structural-functional organization of the transcriptional regulatory regions in the eukaryotic genes

Cytoscape Plugin for Reconstruction of Structural Random Graph Models of Biological Networks

The mammalian circadian clock: Gene regulatory network and computer analysis

Visualization of chromosome-specific DNA Sequences by fluorescence in situ hybridization of microdissection DNA probes with metaphase chromosomes

Relatively conserved common short sequences in transcription factor binding sites and miRNA

Routes of nanoparticle uptake into mammalian organisms, their biocompatibility and cellular effects

Program complex SNP-MED for analysis of single-nucleotide polymorphism (SNP) effects on the function of genes associated with socially significant diseases

Computational modeling of the cell-autonomous mammalian circadian oscillator

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