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The use of single-cell RNA-Seq to understand virus–host interactions

Current opinion in virology, 2018-04, Vol.29, p.39-50

2018

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Guanylate Binding Protein (GBP) 5 Is an Interferon-Inducible Inhibitor of HIV-1 Infectivity

Cell host & microbe, 2016-04, Vol.19 (4), p.504-514

2016

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Entry of Polarized Effector Cells into Quiescence Forces HIV Latency

mBio, 2019-03, Vol.10 (2)

2019

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Role of the cellular factor CTCF in the regulation of bovine leukemia virus latency and three-dimensional chromatin organization

Nucleic acids research, 2022-04, Vol.50 (6), p.3190-3202

2022

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Sex and Age Impact CD4+ T Cell Susceptibility to HIV In Vitro through Cell Activation Dynamics

Cells (Basel, Switzerland), 2023-11, Vol.12 (23), p.2689

2023

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Analysis of HIV-1 Expression Level and Sense of Transcription by High-Throughput Sequencing of the Infected Cell

Journal of Virology, 2011-07, Vol.85 (13), p.6205-6211

2011

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Estimating the net contribution of interleukin‐28B variation to spontaneous hepatitis C virus clearance

Hepatology (Baltimore, Md.), 2011-05, Vol.53 (5), p.1446-1454

2011

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Unique Spectrum of Activity of Prosimian TRIM5α against Exogenous and Endogenous Retroviruses

Journal of Virology, 2011-05, Vol.85 (9), p.4173-4183

2011

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Antiretroviral Activity of Ancestral TRIM5α

Journal of Virology, 2008-03, Vol.82 (5), p.2089-2096

2008

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Exploring m6A and m5C Epitranscriptomes upon Viral Infection: an Example with HIV

Journal of visualized experiments, 2022-03 (181)

2022

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Exploring m6A and m5C Epitranscriptomes upon Viral Infection: an Example with HIV

Journal of visualized experiments, 2022-03 (181)

2022

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Viral cell biology: HIV RNA gets methylated

Nature microbiology, 2016-03, Vol.1 (4), p.16037, Article 16037

Ciuffi, Angela

2016

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Single-virus tracking uncovers the missing link between HIV integration site location and viral gene expression

Nature structural & molecular biology, 2017-01, Vol.24 (1), p.8-11

2017

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Single-Cell Analysis Reveals Heterogeneity of Virus Infection, Pathogenicity, and Host Responses: HIV as a Pioneering Example

Annual review of virology, 2020-09, Vol.7 (1), p.333-350

2020

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Determinants of HIV-1 reservoir size and long-term dynamics during suppressive ART

Nature communications, 2019-07, Vol.10 (1), p.3193-11, Article 3193

2019

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HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modifications

Genome Research, 2007-08, Vol.17 (8), p.1186-1194

2007

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Entry and Transcription as Key Determinants of Differences in CD4 T-Cell Permissiveness to Human Immunodeficiency Virus Type 1 Infection

Journal of Virology, 2004-10, Vol.78 (19), p.10747-10754

2004

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Determinants of HIV-1 broadly neutralizing antibody induction

Nature medicine, 2016-11, Vol.22 (11), p.1260-1267

2016

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Activity of ancestral restriction factors against ancient retroviruses

Retrovirology, 2009-09, Vol.6 (Suppl 2), p.P75-P75, Article P75

2009

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Unravelling HIV-1 Latency, One Cell at a Time

Trends in microbiology (Regular ed.), 2017-11, Vol.25 (11), p.932-941

2017

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Transcriptomic Profiling Reveals Intense Host-Pathogen Dispute Compromising Homeostasis during Acute Rift Valley Fever Virus Infection

Journal of virology, 2023-06, Vol.97 (6), p.e0041523-e0041523

2023

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HIV Modifies the m6A and m5C Epitranscriptomic Landscape of the Host Cell

Frontiers in virology (online), 2021-07, Vol.1

2021

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Epidemiology and determinants of reemerging bacterial sexually transmitted infections (STIs) and emerging STIs in Europe

The Lancet regional health. Europe, 2023-11, Vol.34, p.100742-100742, Article 100742

2023

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Retroviral DNA integration: HIV and the role of LEDGF/p75

Trends in genetics, 2006-07, Vol.22 (7), p.388-395

2006

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Tracing HIV-1 strains that imprint broadly neutralizing antibody responses

Nature (London), 2018-09, Vol.561 (7723), p.406-410

2018

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The use of single-cell RNA-Seq to understand virus–host interactions

Guanylate Binding Protein (GBP) 5 Is an Interferon-Inducible Inhibitor of HIV-1 Infectivity

Entry of Polarized Effector Cells into Quiescence Forces HIV Latency

Role of the cellular factor CTCF in the regulation of bovine leukemia virus latency and three-dimensional chromatin organization

Sex and Age Impact CD4+ T Cell Susceptibility to HIV In Vitro through Cell Activation Dynamics

Analysis of HIV-1 Expression Level and Sense of Transcription by High-Throughput Sequencing of the Infected Cell

Estimating the net contribution of interleukin‐28B variation to spontaneous hepatitis C virus clearance

Unique Spectrum of Activity of Prosimian TRIM5α against Exogenous and Endogenous Retroviruses

Antiretroviral Activity of Ancestral TRIM5α

Exploring m6A and m5C Epitranscriptomes upon Viral Infection: an Example with HIV

Exploring m6A and m5C Epitranscriptomes upon Viral Infection: an Example with HIV

Viral cell biology: HIV RNA gets methylated

Single-virus tracking uncovers the missing link between HIV integration site location and viral gene expression

Single-Cell Analysis Reveals Heterogeneity of Virus Infection, Pathogenicity, and Host Responses: HIV as a Pioneering Example

Determinants of HIV-1 reservoir size and long-term dynamics during suppressive ART

HIV integration site selection: analysis by massively parallel pyrosequencing reveals association with epigenetic modifications

Entry and Transcription as Key Determinants of Differences in CD4 T-Cell Permissiveness to Human Immunodeficiency Virus Type 1 Infection

Determinants of HIV-1 broadly neutralizing antibody induction

Activity of ancestral restriction factors against ancient retroviruses

Unravelling HIV-1 Latency, One Cell at a Time

Transcriptomic Profiling Reveals Intense Host-Pathogen Dispute Compromising Homeostasis during Acute Rift Valley Fever Virus Infection

HIV Modifies the m6A and m5C Epitranscriptomic Landscape of the Host Cell

Epidemiology and determinants of reemerging bacterial sexually transmitted infections (STIs) and emerging STIs in Europe

Retroviral DNA integration: HIV and the role of LEDGF/p75

Tracing HIV-1 strains that imprint broadly neutralizing antibody responses

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