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Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

The ISME Journal, 2016-06, Vol.10 (6), p.1483-1498

2016

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Convergent evolution and adaptation of Pseudomonas aeruginosa within patients with cystic fibrosis

Nature genetics, 2015-01, Vol.47 (1), p.57-64

2015

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Sputum pathogen spectrum and clinical outcomes of upper respiratory tract infection in bronchiectasis exacerbation: a prospective cohort study

Emerging microbes & infections, 2023-12, Vol.12 (1), p.2202277-2202277

2023

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Association of bacterial community types, functional microbial processes and lung disease in cystic fibrosis airways

The ISME Journal, 2022-04, Vol.16 (4), p.905-914

2022

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CRISPR-based rapid and ultra-sensitive diagnostic test for Mycobacterium tuberculosis

Emerging microbes & infections, 2019-01, Vol.8 (1), p.1361-1369

2019

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Spatial distribution of microbial communities in the cystic fibrosis lung

The ISME Journal, 2012-02, Vol.6 (2), p.471-474

2012

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Respiratory microbiota resistance and resilience to pulmonary exacerbation and subsequent antimicrobial intervention

The ISME Journal, 2016-05, Vol.10 (5), p.1081-1091

2016

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Characterization of progressive HIV-associated tuberculosis using 2-deoxy-2-[ 18 F]fluoro-D-glucose positron emission and computed tomography

Nature medicine, 2016-10, Vol.22 (10), p.1090-1093

2016

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Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities

The ISME Journal, 2011-05, Vol.5 (5), p.780-791

2011

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Lytic activity by temperate phages of Pseudomonas aeruginosa in long-term cystic fibrosis chronic lung infections

The ISME Journal, 2015-06, Vol.9 (6), p.1391-1398

2015

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Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation

The ISME Journal, 2014-06, Vol.8 (6), p.1247-1258

2014

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Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis

The ISME Journal, 2011-01, Vol.5 (1), p.20-29

2011

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A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation

The ISME Journal, 2015-03, Vol.9 (4), p.1024-1038

2015

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Reducing bias in bacterial community analysis of lower respiratory infections

The ISME Journal, 2013-04, Vol.7 (4), p.697-706

2013

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Predominant pathogen competition and core microbiota divergence in chronic airway infection

The ISME Journal, 2015-01, Vol.9 (1), p.217-225

2015

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Cointegration as a mechanism for the evolution of a KPC-producing multidrug resistance plasmid in Proteus mirabilis

Emerging microbes & infections, 2020-01, Vol.9 (1), p.1206-1218

2020

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Bacterial load slopes represent biomarkers of tuberculosis therapy success, failure, and relapse

Communications biology, 2021-06, Vol.4 (1), p.664-664, Article 664

2021

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Positive sputum

British dental journal, 2010-09, Vol.209 (6), p.264-264

2010

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Gloeostereum cimri, a novel shelf fungus isolated from a human pulmonary cyst

Emerging microbes & infections, 2020-01, Vol.9 (1), p.1114-1122

2020

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TNF-α/IL-2 ratio discriminates latent from active tuberculosis in immunocompetent children: a pilot study

Pediatric research, 2012-10, Vol.72 (4), p.370-374

2012

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Pulmonary Mycobacterium szulgai infection and treatment in a patient receiving anti-tumor necrosis factor therapy

Nature clinical practice. Rheumatology, 2007-07, Vol.3 (7), p.414-419

2007

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A pulmonary mass caused by Rhodococcus equi infection in a renal transplant recipient

Nature clinical practice. Nephrology, 2008-07, Vol.4 (7), p.398-403

2008

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Community-acquired pneumonia distinguished from influenza infection based on clinical signs and symptoms during a novel (swine) influenza A/H1N1 pandemic

Primary care respiratory journal, 2011-12, Vol.20 (4), p.421-426

2011

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Multiplex polymerase chain reaction for the detection of mycobacterial DNA in cases of tuberculosis and sarcoidosis

Modern pathology, 1999-09, Vol.12 (9), p.854

1999

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Effect of pH and CO2 on in vitro susceptibility of Pseudomonas cepacia to β-lactams

Pediatric research, 1994-03, Vol.35 (3), p.299-302

1994

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Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

Convergent evolution and adaptation of Pseudomonas aeruginosa within patients with cystic fibrosis

Sputum pathogen spectrum and clinical outcomes of upper respiratory tract infection in bronchiectasis exacerbation: a prospective cohort study

Association of bacterial community types, functional microbial processes and lung disease in cystic fibrosis airways

CRISPR-based rapid and ultra-sensitive diagnostic test for Mycobacterium tuberculosis

Spatial distribution of microbial communities in the cystic fibrosis lung

Respiratory microbiota resistance and resilience to pulmonary exacerbation and subsequent antimicrobial intervention

Characterization of progressive HIV-associated tuberculosis using 2-deoxy-2-[ 18 F]fluoro-D-glucose positron emission and computed tomography

Partitioning core and satellite taxa from within cystic fibrosis lung bacterial communities

Lytic activity by temperate phages of Pseudomonas aeruginosa in long-term cystic fibrosis chronic lung infections

Breath gas metabolites and bacterial metagenomes from cystic fibrosis airways indicate active pH neutral 2,3-butanedione fermentation

Phylogenetic and metabolic diversity of bacteria associated with cystic fibrosis

A Winogradsky-based culture system shows an association between microbial fermentation and cystic fibrosis exacerbation

Reducing bias in bacterial community analysis of lower respiratory infections

Predominant pathogen competition and core microbiota divergence in chronic airway infection

Cointegration as a mechanism for the evolution of a KPC-producing multidrug resistance plasmid in Proteus mirabilis

Bacterial load slopes represent biomarkers of tuberculosis therapy success, failure, and relapse

Positive sputum

Gloeostereum cimri, a novel shelf fungus isolated from a human pulmonary cyst

TNF-α/IL-2 ratio discriminates latent from active tuberculosis in immunocompetent children: a pilot study

Pulmonary Mycobacterium szulgai infection and treatment in a patient receiving anti-tumor necrosis factor therapy

A pulmonary mass caused by Rhodococcus equi infection in a renal transplant recipient

Community-acquired pneumonia distinguished from influenza infection based on clinical signs and symptoms during a novel (swine) influenza A/H1N1 pandemic

Multiplex polymerase chain reaction for the detection of mycobacterial DNA in cases of tuberculosis and sarcoidosis

Effect of pH and CO2 on in vitro susceptibility of Pseudomonas cepacia to β-lactams

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