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Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution

Genome biology and evolution, 2013-01, Vol.5 (5), p.954-965

2013

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Widespread and frequent horizontal transfers of transposable elements in plants

Genome research, 2014-05, Vol.24 (5), p.831-838

2014

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Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

Genome Research, 2006-10, Vol.16 (10), p.1262-1269

2006

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A new approach for annotation of transposable elements using small RNA mapping

Nucleic acids research, 2015-07, Vol.43 (13), p.e84-e84

2015

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Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza

The Plant journal : for cell and molecular biology, 2008-03, Vol.53 (6), p.950-959

2008

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Identification of an active LTR retrotransposon in rice

The Plant journal : for cell and molecular biology, 2009-06, Vol.58 (5), p.754-765

2009

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A genetic model for the female sterility barrier between Asian and African cultivated rice species

Genetics (Austin), 2010-08, Vol.185 (4), p.1425-1440

2010

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Reference genome sequence of the model plant Setaria

Nature biotechnology, 2012-06, Vol.30 (6), p.555-561

2012

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Formation of solo-LTRs through unequal homologous recombination counterbalances amplifications of LTR retrotransposons in rice Oryza sativa L

Molecular biology and evolution, 2003-04, Vol.20 (4), p.528-540

2003

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Scoring symptoms of a plant viral disease

Peer Community in Genomics, 2023-05

Panaud, Olivier

2023

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Use of Next Generation Sequencing (NGS) technologies for the genome-wide detection of transposition

Methods in molecular biology (Clifton, N.J.), 2013-01, Vol.1057, p.265

2013

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Diverse and mobile - eccDNA-based identification of carrot low-copy LTR retrotransposons active in callus cultures

The Plant journal : for cell and molecular biology, 2022-04

2022

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Construction and characterization of a knock-down RNA interference line of OsNRPD1 in rice ( Oryza sativa ssp japonica cv Nipponbare)

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2020-03, Vol.375 (1795), p.20190338

2020

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Comparative Genomic Paleontology across Plant Kingdom Reveals the Dynamics of TE-Driven Genome Evolution

Genome biology and evolution, 2013-05, Vol.5 (5), p.954-965

2013

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Horizontal transfer of transposable elements in plants

Communicative & integrative biology, 2008-07, Vol.1 (1), p.74-77

2008

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The amplification dynamics of MITEs and their impact on rice trait variability

The Plant journal : for cell and molecular biology, 2021-04

2021

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Transpositional landscape of the rice genome revealed by paired‐end mapping of high‐throughput re‐sequencing data

The Plant journal : for cell and molecular biology, 2011-04, Vol.66 (2), p.241-246

2011

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QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica

Frontiers in plant science, 2018-07, Vol.9

2018

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RetrOryza: a database of the rice LTR-retrotransposons

Nucleic acids research, 2007-01, Vol.35 (Database issue), p.D66-D70

2007

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Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza

The Plant journal : for cell and molecular biology, 2007-10, Vol.52 (2), p.342-351

2007

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Isolation and characterisation of a bacterial strain degrading the herbicide sulcotrione from an agricultural soil

Pest management science, 2012-03, Vol.68 (3), p.340-347

2012

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Microsatellite marker development, mapping and applications in rice genetics and breeding

Plant molecular biology, 1997-09, Vol.35 (1/2), p.89-99

1997

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RDA derived Oryza minuta-specific clones to probe genomic conservation across Oryza and introgression into rice (O. sativa L.)

Euphytica, 2010-11, Vol.176 (2), p.269-279

2010

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Paleogenomic analysis of the short arm of chromosome 3 reveals the history of the African and Asian progenitors of cultivated rices

Genome biology and evolution, 2010-01, Vol.2, p.132-139

2010

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Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution

Widespread and frequent horizontal transfers of transposable elements in plants

Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

A new approach for annotation of transposable elements using small RNA mapping

Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza

Identification of an active LTR retrotransposon in rice

A genetic model for the female sterility barrier between Asian and African cultivated rice species

Reference genome sequence of the model plant Setaria

Formation of solo-LTRs through unequal homologous recombination counterbalances amplifications of LTR retrotransposons in rice Oryza sativa L

Scoring symptoms of a plant viral disease

Use of Next Generation Sequencing (NGS) technologies for the genome-wide detection of transposition

Diverse and mobile - eccDNA-based identification of carrot low-copy LTR retrotransposons active in callus cultures

Construction and characterization of a knock-down RNA interference line of OsNRPD1 in rice ( Oryza sativa ssp japonica cv Nipponbare)

Comparative Genomic Paleontology across Plant Kingdom Reveals the Dynamics of TE-Driven Genome Evolution

Horizontal transfer of transposable elements in plants

The amplification dynamics of MITEs and their impact on rice trait variability

Transpositional landscape of the rice genome revealed by paired‐end mapping of high‐throughput re‐sequencing data

QTL Mapping Combined With Comparative Analyses Identified Candidate Genes for Reduced Shattering in Setaria italica

RetrOryza: a database of the rice LTR-retrotransposons

Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza

Isolation and characterisation of a bacterial strain degrading the herbicide sulcotrione from an agricultural soil

Microsatellite marker development, mapping and applications in rice genetics and breeding

RDA derived Oryza minuta-specific clones to probe genomic conservation across Oryza and introgression into rice (O. sativa L.)

Paleogenomic analysis of the short arm of chromosome 3 reveals the history of the African and Asian progenitors of cultivated rices

Reference genome sequence of the model plant Setaria

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