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Retrotranspositional landscape of Asian rice revealed by 3000 genomes

Nature communications, 2019-01, Vol.10 (1), p.24-12, Article 24

2019

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Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution

Genome biology and evolution, 2013-01, Vol.5 (5), p.954-965

2013

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Widespread and frequent horizontal transfers of transposable elements in plants

Genome research, 2014-05, Vol.24 (5), p.831-838

2014

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Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

Genome Research, 2006-10, Vol.16 (10), p.1262-1269

2006

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DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses

Nature communications, 2016-09, Vol.7 (1), p.12790-12790, Article 12790

2016

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Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation

Nature communications, 2024-07, Vol.15 (1), p.6308-12, Article 6308

2024

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Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

Proceedings of the National Academy of Sciences - PNAS, 2006-08, Vol.103 (31), p.11647-11652

2006

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A new approach for annotation of transposable elements using small RNA mapping

Nucleic acids research, 2015-07, Vol.43 (13), p.e84-e84

2015

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Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza

The Plant journal : for cell and molecular biology, 2008-03, Vol.53 (6), p.950-959

2008

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Identification of an active LTR retrotransposon in rice

The Plant journal : for cell and molecular biology, 2009-06, Vol.58 (5), p.754-765

2009

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A genetic model for the female sterility barrier between Asian and African cultivated rice species

Genetics (Austin), 2010-08, Vol.185 (4), p.1425-1440

2010

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Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution

Mitochondrial DNA. Part B. Resources, 2019-09, Vol.4 (2), p.3256-3257

2019

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Diverse and mobile: eccDNA‐based identification of carrot low‐copy‐number LTR retrotransposons active in callus cultures

The Plant journal : for cell and molecular biology, 2022-06, Vol.110 (6), p.1811-1828

2022

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Oak genome reveals facets of long lifespan

Nature plants, 2018-07, Vol.4 (7), p.440-452

2018

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Reference genome sequence of the model plant Setaria

Nature biotechnology, 2012-06, Vol.30 (6), p.555-561

2012

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Amplification dynamics of miniature inverted‐repeat transposable elements and their impact on rice trait variability

The Plant journal : for cell and molecular biology, 2021-07, Vol.107 (1), p.118-135

2021

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Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

Proceedings of the National Academy of Sciences - PNAS, 2013-03, Vol.110 (13), p.5247-5252

2013

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Formation of solo-LTRs through unequal homologous recombination counterbalances amplifications of LTR retrotransposons in rice Oryza sativa L

Molecular biology and evolution, 2003-04, Vol.20 (4), p.528-540

2003

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Scoring symptoms of a plant viral disease

Peer Community in Genomics, 2023-05

Panaud, Olivier

2023

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Use of Next Generation Sequencing (NGS) technologies for the genome-wide detection of transposition

Methods in molecular biology (Clifton, N.J.), 2013-01, Vol.1057, p.265

2013

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Diverse and mobile - eccDNA-based identification of carrot low-copy LTR retrotransposons active in callus cultures

The Plant journal : for cell and molecular biology, 2022-04

2022

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Construction and characterization of a knock-down RNA interference line of OsNRPD1 in rice ( Oryza sativa ssp japonica cv Nipponbare)

Philosophical transactions of the Royal Society of London. Series B. Biological sciences, 2020-03, Vol.375 (1795), p.20190338

2020

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Comparative Genomic Paleontology across Plant Kingdom Reveals the Dynamics of TE-Driven Genome Evolution

Genome biology and evolution, 2013-05, Vol.5 (5), p.954-965

2013

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The amplification dynamics of MITEs and their impact on rice trait variability

The Plant journal : for cell and molecular biology, 2021-04

2021

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Transpositional landscape of the rice genome revealed by paired‐end mapping of high‐throughput re‐sequencing data

The Plant journal : for cell and molecular biology, 2011-04, Vol.66 (2), p.241-246

2011

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Retrotranspositional landscape of Asian rice revealed by 3000 genomes

Comparative genomic paleontology across plant kingdom reveals the dynamics of TE-driven genome evolution

Widespread and frequent horizontal transfers of transposable elements in plants

Doubling genome size without polyploidization: dynamics of retrotransposition-driven genomic expansions in Oryza australiensis, a wild relative of rice

DNA transposon activity is associated with increased mutation rates in genes of rice and other grasses

Genome of the early spider-orchid Ophrys sphegodes provides insights into sexual deception and pollinator adaptation

Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

A new approach for annotation of transposable elements using small RNA mapping

Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza

Identification of an active LTR retrotransposon in rice

A genetic model for the female sterility barrier between Asian and African cultivated rice species

Characterization of the complete plastome of Ophrys aveyronensis, a Euro-Mediterranean orchid with an intriguing disjunct geographic distribution

Diverse and mobile: eccDNA‐based identification of carrot low‐copy‐number LTR retrotransposons active in callus cultures

Oak genome reveals facets of long lifespan

Reference genome sequence of the model plant Setaria

Amplification dynamics of miniature inverted‐repeat transposable elements and their impact on rice trait variability

Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida

Formation of solo-LTRs through unequal homologous recombination counterbalances amplifications of LTR retrotransposons in rice Oryza sativa L

Scoring symptoms of a plant viral disease

Use of Next Generation Sequencing (NGS) technologies for the genome-wide detection of transposition

Diverse and mobile - eccDNA-based identification of carrot low-copy LTR retrotransposons active in callus cultures

Construction and characterization of a knock-down RNA interference line of OsNRPD1 in rice ( Oryza sativa ssp japonica cv Nipponbare)

Comparative Genomic Paleontology across Plant Kingdom Reveals the Dynamics of TE-Driven Genome Evolution

The amplification dynamics of MITEs and their impact on rice trait variability

Transpositional landscape of the rice genome revealed by paired‐end mapping of high‐throughput re‐sequencing data

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