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A general model to predict small molecule substrates of enzymes based on machine and deep learning

Nature communications, 2023-05, Vol.14 (1), p.2787-2787, Article 2787

2023

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Machine Learning Applied to Predicting Microorganism Growth Temperatures and Enzyme Catalytic Optima

ACS synthetic biology, 2019-06, Vol.8 (6), p.1411-1420

2019

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The influence of alternative pathways of respiration that utilize branched‐chain amino acids following water shortage in Arabidopsis

Plant, cell and environment, 2016-06, Vol.39 (6), p.1304-1319

2016

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Directed evolution of a far-red fluorescent rhodopsin

Proceedings of the National Academy of Sciences - PNAS, 2014-09, Vol.111 (36), p.13034-13039

2014

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A synthesis of bacterial and archaeal phenotypic trait data

Scientific data, 2020-06, Vol.7 (1), p.170-170, Article 170

2020

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Different Routes of Protein Folding Contribute to Improved Protein Production in Saccharomyces cerevisiae

mBio, 2020-11, Vol.11 (6), p.1

2020

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Adaptation of a Microfluidic qPCR System for Enzyme Kinetic Studies

ACS omega, 2021-01, Vol.6 (3), p.1985-1990

2021

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Applications of Protein Engineering and Directed Evolution in Plant Research

Plant physiology (Bethesda), 2019-03, Vol.179 (3), p.907-917

2019

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3D‐Printed Phenacrylate Decarboxylase Flow Reactors for the Chemoenzymatic Synthesis of 4‐Hydroxystilbene

Chemistry : a European journal, 2019-12, Vol.25 (70), p.15998-16001

2019

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Expanding functional protein sequence spaces using generative adversarial networks

Nature machine intelligence, 2021-04, Vol.3 (4), p.324-333

2021

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Chiral Alcohols from Alkenes and Water: Directed Evolution of a Styrene Hydratase

Angewandte Chemie International Edition, 2023-02, Vol.62 (7), p.e202215093-n/a

International ed. in English, 2023

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ANT: Software for Generating and Evaluating Degenerate Codons for Natural and Expanded Genetic Codes

ACS synthetic biology, 2015-08, Vol.4 (8), p.935-938

2015

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Modeling‐Assisted Design of Thermostable Benzaldehyde Lyases from Rhodococcus erythropolis for Continuous Production of α‐Hydroxy Ketones

Chembiochem : a European journal of chemical biology, 2022-04, Vol.23 (7), p.e202100468-n/a

2022

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Archaerhodopsin variants with enhanced voltage-sensitive fluorescence in mammalian and Caenorhabditis elegans neurons

Nature communications, 2014-09, Vol.5 (1), p.4894-4894, Article 4894

2014

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Discovery of Two Novel Oxidases Using a High‐Throughput Activity Screen

Chembiochem : a European journal of chemical biology, 2022-01, Vol.23 (2), p.e202100510-n/a

2022

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Ribonucleotides incorporated by the yeast mitochondrial DNA polymerase are not repaired

Proceedings of the National Academy of Sciences - PNAS, 2017-11, Vol.114 (47), p.12466-12471

2017

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Photo-identification of individual weedy seadragons Phyllopteryx taeniolatus and its application in estimating population dynamics

Journal of fish biology, 2011-06, Vol.78 (6), p.1757-1768

Martin-Smith, K. M.

2011

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Elimination of rNMPs from mitochondrial DNA has no effect on its stability

Proceedings of the National Academy of Sciences - PNAS, 2020-06, Vol.117 (25), p.14306-14313

2020

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Effects of oral N-acetylcysteine on walking capacity, leg reactive hyperemia, and inflammatory and angiogenic mediators in patients with intermittent claudication

American journal of physiology. Heart and circulatory physiology, 2015-09, Vol.309 (5), p.H897-H905

2015

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Prediction model for manure zinc excretion in laying hens

Poultry science, 2018-01, Vol.97 (1), p.267-270

2018

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GLYCOLATE OXIDASE3, a Glycolate Oxidase Homolog of Yeast l-Lactate Cytochrome c Oxidoreductase, Supports l-Lactate Oxidation in Roots of Arabidopsis

Plant physiology (Bethesda), 2015-10, Vol.169 (2), p.1042-1061

2015

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Directed Evolution of (R)‑2-Hydroxyglutarate Dehydrogenase Improves 2‑Oxoadipate Reduction by 2 Orders of Magnitude

ACS synthetic biology, 2022-08, Vol.11 (8), p.2779-2790

2022

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2-Hydroxy Acids in Plant Metabolism

The arabidopsis book, 2015, Vol.2015 (13), p.e0182-e0182

2015

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Metabolic Engineering of Photorespiration

Methods in molecular biology (Clifton, N.J.), 2017-01, Vol.1653, p.137

2017

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Plant d-2-Hydroxyglutarate Dehydrogenase Participates in the Catabolism of Lysine Especially during Senescence

The Journal of biological chemistry, 2011-04, Vol.286 (13), p.11382-11390

2011

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A general model to predict small molecule substrates of enzymes based on machine and deep learning

Machine Learning Applied to Predicting Microorganism Growth Temperatures and Enzyme Catalytic Optima

The influence of alternative pathways of respiration that utilize branched‐chain amino acids following water shortage in Arabidopsis

Directed evolution of a far-red fluorescent rhodopsin

A synthesis of bacterial and archaeal phenotypic trait data

Different Routes of Protein Folding Contribute to Improved Protein Production in Saccharomyces cerevisiae

Adaptation of a Microfluidic qPCR System for Enzyme Kinetic Studies

Applications of Protein Engineering and Directed Evolution in Plant Research

3D‐Printed Phenacrylate Decarboxylase Flow Reactors for the Chemoenzymatic Synthesis of 4‐Hydroxystilbene

Expanding functional protein sequence spaces using generative adversarial networks

Chiral Alcohols from Alkenes and Water: Directed Evolution of a Styrene Hydratase

ANT: Software for Generating and Evaluating Degenerate Codons for Natural and Expanded Genetic Codes

Modeling‐Assisted Design of Thermostable Benzaldehyde Lyases from Rhodococcus erythropolis for Continuous Production of α‐Hydroxy Ketones

Archaerhodopsin variants with enhanced voltage-sensitive fluorescence in mammalian and Caenorhabditis elegans neurons

Discovery of Two Novel Oxidases Using a High‐Throughput Activity Screen

Ribonucleotides incorporated by the yeast mitochondrial DNA polymerase are not repaired

Photo-identification of individual weedy seadragons Phyllopteryx taeniolatus and its application in estimating population dynamics

Elimination of rNMPs from mitochondrial DNA has no effect on its stability

Effects of oral N-acetylcysteine on walking capacity, leg reactive hyperemia, and inflammatory and angiogenic mediators in patients with intermittent claudication

Prediction model for manure zinc excretion in laying hens

GLYCOLATE OXIDASE3, a Glycolate Oxidase Homolog of Yeast l-Lactate Cytochrome c Oxidoreductase, Supports l-Lactate Oxidation in Roots of Arabidopsis

Directed Evolution of (R)‑2-Hydroxyglutarate Dehydrogenase Improves 2‑Oxoadipate Reduction by 2 Orders of Magnitude

2-Hydroxy Acids in Plant Metabolism

Metabolic Engineering of Photorespiration

Plant d-2-Hydroxyglutarate Dehydrogenase Participates in the Catabolism of Lysine Especially during Senescence

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