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microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation

PloS one, 2022-11, Vol.17 (11), p.e0277601-e0277601

2022

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microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation

PloS one, 2022-11, Vol.17 (11), p.e0277601

2022

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GROWSCREEN-Rhizo is a novel phenotyping robot enabling simultaneous measurements of root and shoot growth for plants grown in soil-filled rhizotrons

Functional plant biology : FPB, 2012-01, Vol.39 (11), p.891

2012

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Editorial: Computer vision in plant phenotyping and agriculture

Frontiers in artificial intelligence, 2023-05, Vol.6, p.1187301-1187301

2023

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Citizen crowds and experts: observer variability in image-based plant phenotyping

Plant methods, 2018-02, Vol.14 (1), p.12-12, Article 12

2018

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ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud

SoftwareX, 2024-05, Vol.26, p.101638, Article 101638

2024

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Temperature responses of roots: impact on growth, root system architecture and implications for phenotyping

Functional plant biology : FPB, 2009-01, Vol.36 (11), p.947

2009

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Fast High Resolution Volume Carving for 3D Plant Shoot Reconstruction

Frontiers in plant science, 2017-09, Vol.8, p.1680-1680

2017

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The platform GrowScreen - Agar enables identification of phenotypic diversity in root and shoot growth traits of agar grown plants

Plant methods, 2020-06, Vol.16 (1), p.89-89, Article 89

2020

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Smuggling on the Nanoscale-Fusogenic Liposomes Enable Efficient RNA-Transfer with Negligible Immune Response In Vitro and In Vivo

Pharmaceutics, 2023-04, Vol.15 (4), p.1210

2023

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QTL analysis of early stage heterosis for biomass in Arabidopsis

Theoretical and applied genetics, 2010-01, Vol.120 (2), p.227-237

2010

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Finely-grained annotated datasets for image-based plant phenotyping

Pattern recognition letters, 2016-10, Vol.81, p.80-89

2016

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Machine Learning for Plant Phenotyping Needs Image Processing

Trends in plant science, 2016-12, Vol.21 (12), p.989-991

2016

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Spatio-spectral deconvolution for high resolution spectral imaging with an application to the estimation of sun-induced fluorescence

Remote sensing of environment, 2021-12, Vol.267, p.112718, Article 112718

2021

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Sharing the Right Data Right: A Symbiosis with Machine Learning

Trends in plant science, 2019-02, Vol.24 (2), p.99-102

2019

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phenoSeeder - A Robot System for Automated Handling and Phenotyping of Individual Seeds

Plant physiology (Bethesda), 2016-11, Vol.172 (3), p.1358-1370

2016

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Leaf segmentation in plant phenotyping: a collation study

Machine vision and applications, 2016-05, Vol.27 (4), p.585-606

2016

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stereo imaging system for measuring structural parameters of plant canopies

Plant, cell and environment, 2007-10, Vol.30 (10), p.1299-1308

2007

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3D Surface Reconstruction of Plant Seeds by Volume Carving: Performance and Accuracies

Frontiers in plant science, 2016-06, Vol.7, p.745-745

2016

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leaf angle distribution of natural plant populations: assessing the canopy with a novel software tool

Plant methods, 2015-02, Vol.11 (1), p.11-11

2015

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A Riemannian Bayesian Framework for Estimating Diffusion Tensor Images

International journal of computer vision, 2016-12, Vol.120 (3), p.272-299

2016

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phenoVein—A Tool for Leaf Vein Segmentation and Analysis

Plant physiology (Bethesda), 2015-12, Vol.169 (4), p.2359-2370

2015

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Recovery dynamics of growth, photosynthesis and carbohydrate accumulation after de-submergence: a comparison between two wetland plants showing escape and quiescence strategies

Annals of botany, 2011-01, Vol.107 (1), p.49-63

2011

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Modeling leaf growth of rosette plants using infrared stereo image sequences

Computers and electronics in agriculture, 2015-01, Vol.110, p.78-90

2015

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Diffusion-Like Reconstruction Schemes from Linear Data Models

Lecture notes in computer science, 2006, p.51-60

2006

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microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation

microbeSEG: A deep learning software tool with OMERO data management for efficient and accurate cell segmentation

GROWSCREEN-Rhizo is a novel phenotyping robot enabling simultaneous measurements of root and shoot growth for plants grown in soil-filled rhizotrons

Editorial: Computer vision in plant phenotyping and agriculture

Citizen crowds and experts: observer variability in image-based plant phenotyping

ObiWan-Microbi: OMERO-based integrated workflow for annotating microbes in the cloud

Temperature responses of roots: impact on growth, root system architecture and implications for phenotyping

Fast High Resolution Volume Carving for 3D Plant Shoot Reconstruction

The platform GrowScreen - Agar enables identification of phenotypic diversity in root and shoot growth traits of agar grown plants

Smuggling on the Nanoscale-Fusogenic Liposomes Enable Efficient RNA-Transfer with Negligible Immune Response In Vitro and In Vivo

QTL analysis of early stage heterosis for biomass in Arabidopsis

Finely-grained annotated datasets for image-based plant phenotyping

Machine Learning for Plant Phenotyping Needs Image Processing

Spatio-spectral deconvolution for high resolution spectral imaging with an application to the estimation of sun-induced fluorescence

Sharing the Right Data Right: A Symbiosis with Machine Learning

phenoSeeder - A Robot System for Automated Handling and Phenotyping of Individual Seeds

Leaf segmentation in plant phenotyping: a collation study

stereo imaging system for measuring structural parameters of plant canopies

3D Surface Reconstruction of Plant Seeds by Volume Carving: Performance and Accuracies

leaf angle distribution of natural plant populations: assessing the canopy with a novel software tool

A Riemannian Bayesian Framework for Estimating Diffusion Tensor Images

phenoVein—A Tool for Leaf Vein Segmentation and Analysis

Recovery dynamics of growth, photosynthesis and carbohydrate accumulation after de-submergence: a comparison between two wetland plants showing escape and quiescence strategies

Modeling leaf growth of rosette plants using infrared stereo image sequences

Diffusion-Like Reconstruction Schemes from Linear Data Models

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