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RNAcentral 2021: secondary structure integration, improved sequence search and new member databases

Nucleic acids research, 2021-01, Vol.49 (D1), p.D212-D220

2021

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RNAcentral: a hub of information for non-coding RNA sequences

Nucleic acids research, 2019-01, Vol.47 (D1), p.D221-D229

2019

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SNHG5 promotes colorectal cancer cell survival by counteracting STAU1-mediated mRNA destabilization

Nature communications, 2016-12, Vol.7 (1), p.13875-13875, Article 13875

2016

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The RNAsnp web server: predicting SNP effects on local RNA secondary structure

Nucleic acids research, 2013-07, Vol.41 (Web Server issue), p.W475-W479

2013

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The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression

Neurobiology of disease, 2023-03, Vol.178, p.105980, Article 105980

2023

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The identification and functional annotation of RNA structures conserved in vertebrates

Genome research, 2017-08, Vol.27 (8), p.1371-1383

2017

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RNAscClust: clustering RNA sequences using structure conservation and graph based motifs

Bioinformatics (Oxford, England), 2017-07, Vol.33 (14), p.2089-2096

2017

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Proteomic profiling of the thrombin-activated canine platelet secretome (CAPS)

PloS one, 2019-11, Vol.14 (11), p.e0224891-e0224891

2019

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DotAligner: identification and clustering of RNA structure motifs

Genome Biology, 2017-12, Vol.18 (1), p.244-244, Article 244

2017

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Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments

Nucleic acids research, 2008-11, Vol.36 (20), p.6355-6362

2008

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The impact of PrsA over-expression on the Bacillus subtilis transcriptome during fed-batch fermentation of alpha-amylase production

Frontiers in microbiology, 2022-08, Vol.13, p.909493

2022

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Clusters of mammalian conserved RNA structures in UTRs associate with RBP binding sites

NAR genomics and bioinformatics, 2024-09, Vol.6 (3)

2024

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Associating transcription factors and conserved RNA structures with gene regulation in the human brain

Scientific reports, 2017-07, Vol.7 (1), p.5776-16, Article 5776

2017

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RNA-Seq Study on the Longissimus thoracis Muscle of Italian Large White Pigs Fed Extruded Linseed with or without Antioxidants and Polyphenols

Animals (Basel), 2023-03, Vol.13 (7), p.1187

2023

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Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells

Scientific reports, 2016-10, Vol.6 (1), p.34589, Article 34589

2016

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Identification and characterization of novel conserved RNA structures in Drosophila

BMC genomics, 2018-12, Vol.19 (1), p.899-899, Article 899

2018

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Development of the Entorhinal Cortex Occurs via Parallel Lamination During Neurogenesis

Frontiers in neuroanatomy, 2021-05, Vol.15, p.663667-663667

2021

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PETcofold: predicting conserved interactions and structures of two multiple alignments of RNA sequences

Bioinformatics, 2011-01, Vol.27 (2), p.211-219

2011

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Progress and harmonization of gene editing to treat human diseases: Proceeding of COST Action CA21113 GenE-HumDi

Molecular therapy. Nucleic acids, 2023-12, Vol.34, p.102066-102066, Article 102066

2023

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RILogo: visualizing RNA―RNA interactions

Bioinformatics (Oxford, England), 2012-10, Vol.28 (19), p.2523-2526

2012

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RNAcentral: a hub of information for non-coding RNA sequences

Nucleic acids research, 2019-01, Vol.47 (D1), p.D1250-D1251

2019

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Production of human entorhinal stellate cell-like cells by forward programming shows an important role of Foxp1 in reprogramming

Frontiers in cell and developmental biology, 2022-08, Vol.10, p.976549-976549

2022

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Modelling Nonalcoholic Steatohepatitis In Vivo—A Close Transcriptomic Similarity Supports the Guinea Pig Disease Model

Biomedicines, 2021-09, Vol.9 (9), p.1198

2021

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Structured RNAs and synteny regions in the pig genome

BMC genomics, 2014-06, Vol.15 (1), p.459-459, Article 459

2014

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RNAcentral 2021: secondary structure integration, improved sequence search and new member databases

RNAcentral: a hub of information for non-coding RNA sequences

SNHG5 promotes colorectal cancer cell survival by counteracting STAU1-mediated mRNA destabilization

The RNAsnp web server: predicting SNP effects on local RNA secondary structure

The transcriptomic landscape of neurons carrying PSEN1 mutations reveals changes in extracellular matrix components and non-coding gene expression

The identification and functional annotation of RNA structures conserved in vertebrates

RNAscClust: clustering RNA sequences using structure conservation and graph based motifs

Proteomic profiling of the thrombin-activated canine platelet secretome (CAPS)

DotAligner: identification and clustering of RNA structure motifs

Unifying evolutionary and thermodynamic information for RNA folding of multiple alignments

The impact of PrsA over-expression on the Bacillus subtilis transcriptome during fed-batch fermentation of alpha-amylase production

Clusters of mammalian conserved RNA structures in UTRs associate with RBP binding sites

Associating transcription factors and conserved RNA structures with gene regulation in the human brain

Generating universal anti-CD19 CAR T cells with a defined memory phenotype by CRISPR/Cas9 editing and safety evaluation of the transcriptome

RNA-Seq Study on the Longissimus thoracis Muscle of Italian Large White Pigs Fed Extruded Linseed with or without Antioxidants and Polyphenols

Differential transcriptional responses to Ebola and Marburg virus infection in bat and human cells

Identification and characterization of novel conserved RNA structures in Drosophila

Development of the Entorhinal Cortex Occurs via Parallel Lamination During Neurogenesis

PETcofold: predicting conserved interactions and structures of two multiple alignments of RNA sequences

Progress and harmonization of gene editing to treat human diseases: Proceeding of COST Action CA21113 GenE-HumDi

RILogo: visualizing RNA―RNA interactions

RNAcentral: a hub of information for non-coding RNA sequences

Production of human entorhinal stellate cell-like cells by forward programming shows an important role of Foxp1 in reprogramming

Modelling Nonalcoholic Steatohepatitis In Vivo—A Close Transcriptomic Similarity Supports the Guinea Pig Disease Model

Structured RNAs and synteny regions in the pig genome

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