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DeepLoc 2.0: multi-label subcellular localization prediction using protein language models

Nucleic acids research, 2022-07, Vol.50 (W1), p.W228-W234

2022

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DeepLoc: prediction of protein subcellular localization using deep learning

Bioinformatics (Oxford, England), 2017-11, Vol.33 (21), p.3387-3395

2017

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NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning

Proteins, structure, function, and bioinformatics, 2019-06, Vol.87 (6), p.520-527

2019

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Metagenomic species profiling using universal phylogenetic marker genes

Nature methods, 2013-12, Vol.10 (12), p.1196-1199

2013

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A Brief History of Protein Sorting Prediction

The Protein Journal, 2019-06, Vol.38 (3), p.200-216

2019

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Predicting Secretory Proteins with SignalP

Methods in molecular biology (Clifton, N.J.), 2017, Vol.1611, p.59

Nielsen, Henrik

2017

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MAP kinase substrate MKS1 is a regulator of plant defense responses

The EMBO journal, 2005-07, Vol.24 (14), p.2579-2589

2005

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An introduction to deep learning on biological sequence data: examples and solutions

Bioinformatics (Oxford, England), 2017-11, Vol.33 (22), p.3685-3690

2017

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Locating proteins in the cell using TargetP, SignalP and related tools

Nature protocols, 2007-04, Vol.2 (4), p.953-971

2007

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Arabidopsis MAP kinase 4 regulates gene expression through transcription factor release in the nucleus

The EMBO journal, 2008-08, Vol.27 (16), p.2214-2221

2008

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Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity

Nucleic acids research, 2016-09, Vol.44 (16), p.7884-7895

2016

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A computational framework to integrate high-throughput '-omics' datasets for the identification of potential mechanistic links

Nature protocols, 2018-12, Vol.13 (12), p.2781-2800

2018

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Prediction of twin-arginine signal peptides

BMC bioinformatics, 2005-07, Vol.6 (1), p.167-167, Article 167

2005

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The identification and functional annotation of RNA structures conserved in vertebrates

Genome research, 2017-08, Vol.27 (8), p.1371-1383

2017

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Influence of Insulin Receptor Single Nucleotide Polymorphisms on Glycaemic Control and Formation of Anti-Insulin Antibodies in Diabetes Mellitus

International journal of molecular sciences, 2022-06, Vol.23 (12), p.6481

2022

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Probe selection for DNA microarrays using OligoWiz

Nature protocols, 2007-11, Vol.2 (11), p.2677-2691

2007

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Prediction of lipoprotein signal peptides in Gram‐negative bacteria

Protein science, 2003-08, Vol.12 (8), p.1652-1662

2003

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Progressive segregation of the Escherichia coli chromosome

Molecular microbiology, 2006-07, Vol.61 (2), p.383-393

2006

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OligoWiz 2.0--integrating sequence feature annotation into the design of microarray probes

Nucleic acids research, 2005-07, Vol.33 (Web Server issue), p.W611-W615

2005

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Group I introns: Moving in new directions

RNA biology, 2009-09, Vol.6 (4), p.375-383

2009

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The dynamic landscape of peptide activity prediction

Computational and structural biotechnology journal, 2022, Vol.20, p.6526-6533

2022

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The Association between Genetics and Response to Treatment with Biologics in Patients with Psoriasis, Psoriatic Arthritis, Rheumatoid Arthritis, and Inflammatory Bowel Diseases: A Systematic Review and Meta-Analysis

International journal of molecular sciences, 2024-06, Vol.25 (11), p.5793

2024

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Blood Cell Biomarkers of Inflammation and Cytokine Levels as Predictors of Response to Biologics in Patients with Psoriasis

International journal of molecular sciences, 2023-03, Vol.24 (7), p.6111

2023

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Synthesis of RNA by in vitro transcription

Methods in molecular biology (Clifton, N.J.), 2011, Vol.703, p.29

2011

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Knock-Down of a Novel snoRNA in Tetrahymena Reveals a Dual Role in 5.8S rRNA Processing and Generation of a 26S rRNA Fragment

Biomolecules (Basel, Switzerland), 2018-10, Vol.8 (4), p.128

2018

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DeepLoc 2.0: multi-label subcellular localization prediction using protein language models

DeepLoc: prediction of protein subcellular localization using deep learning

NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning

Metagenomic species profiling using universal phylogenetic marker genes

A Brief History of Protein Sorting Prediction

Predicting Secretory Proteins with SignalP

MAP kinase substrate MKS1 is a regulator of plant defense responses

An introduction to deep learning on biological sequence data: examples and solutions

Locating proteins in the cell using TargetP, SignalP and related tools

Arabidopsis MAP kinase 4 regulates gene expression through transcription factor release in the nucleus

Profiling of 2'-O-Me in human rRNA reveals a subset of fractionally modified positions and provides evidence for ribosome heterogeneity

A computational framework to integrate high-throughput '-omics' datasets for the identification of potential mechanistic links

Prediction of twin-arginine signal peptides

The identification and functional annotation of RNA structures conserved in vertebrates

Influence of Insulin Receptor Single Nucleotide Polymorphisms on Glycaemic Control and Formation of Anti-Insulin Antibodies in Diabetes Mellitus

Probe selection for DNA microarrays using OligoWiz

Prediction of lipoprotein signal peptides in Gram‐negative bacteria

Progressive segregation of the Escherichia coli chromosome

OligoWiz 2.0--integrating sequence feature annotation into the design of microarray probes

Group I introns: Moving in new directions

The dynamic landscape of peptide activity prediction

The Association between Genetics and Response to Treatment with Biologics in Patients with Psoriasis, Psoriatic Arthritis, Rheumatoid Arthritis, and Inflammatory Bowel Diseases: A Systematic Review and Meta-Analysis

Blood Cell Biomarkers of Inflammation and Cytokine Levels as Predictors of Response to Biologics in Patients with Psoriasis

Synthesis of RNA by in vitro transcription

Knock-Down of a Novel snoRNA in Tetrahymena Reveals a Dual Role in 5.8S rRNA Processing and Generation of a 26S rRNA Fragment

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