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InterPro in 2022

Nucleic acids research, 2023-01, Vol.51 (D1), p.D418-D427

2023

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CATH: increased structural coverage of functional space

Nucleic acids research, 2021-01, Vol.49 (D1), p.D266-D273

2021

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The InterPro protein families and domains database: 20 years on

Nucleic acids research, 2021-01, Vol.49 (D1), p.D344-D354

2021

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CATH: an expanded resource to predict protein function through structure and sequence

Nucleic acids research, 2017-01, Vol.45 (D1), p.D289-D295

2017

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VarSite: Disease variants and protein structure

Protein science, 2020-01, Vol.29 (1), p.111-119

2020

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Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Biochemical journal, 2013-02, Vol.449 (3), p.581-594

2013

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Protein function prediction using domain families

BMC bioinformatics, 2013-02, Vol.14 Suppl 3 (Suppl 3), p.S5-S5, Article S5

2013

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Computational approaches to predict protein functional families and functional sites

Current opinion in structural biology, 2021-10, Vol.70, p.108-122

2021

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Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Proceedings of the National Academy of Sciences - PNAS, 2014-02, Vol.111 (6), p.2223-2228

2014

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CATH: expanding the horizons of structure-based functional annotations for genome sequences

Nucleic acids research, 2019-01, Vol.47 (D1), p.D280-D284

2019

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Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

Bioinformatics, 2015-11, Vol.31 (21), p.3460-3467

2015

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Biological impact of mutually exclusive exon switching

PLoS computational biology, 2021-03, Vol.17 (3), p.e1008708-e1008708

2021

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Generating functional protein variants with variational autoencoders

PLoS computational biology, 2021-02, Vol.17 (2), p.e1008736-e1008736

2021

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Protein function annotation using protein domain family resources

Methods (San Diego, Calif.), 2016-01, Vol.93, p.24-34

2016

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New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

Nucleic acids research, 2013-01, Vol.41 (Database issue), p.D490-D498

2013

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Protein function prediction – the power of multiplicity

Trends in biotechnology (Regular ed.), 2009-04, Vol.27 (4), p.210-219

2009

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Predicting human and viral protein variants affecting COVID-19 susceptibility and repurposing therapeutics

Scientific reports, 2024-06, Vol.14 (1), p.14208-19, Article 14208

2024

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Gene3D: expanding the utility of domain assignments

Nucleic acids research, 2016-01, Vol.44 (D1), p.D404-D409

2016

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An analysis of tissue-specific alternative splicing at the protein level

PLoS computational biology, 2020-10, Vol.16 (10), p.e1008287-e1008287

2020

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CATH FunFHMMer web server: protein functional annotations using functional family assignments

Nucleic acids research, 2015-07, Vol.43 (W1), p.W148-W153

2015

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Low-Density Lipoprotein Receptor Gene Familial Hypercholesterolemia Variant Database: Update and Pathological Assessment

Annals of human genetics, 2012-09, Vol.76 (5), p.387-401

2012

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Exploring the structure and function paradigm

Current opinion in structural biology, 2008-06, Vol.18 (3), p.394-402

2008

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Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster

PLoS computational biology, 2017-10, Vol.13 (10), p.e1005791-e1005791

2017

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Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies

PLoS computational biology, 2012-03, Vol.8 (3), p.e1002403-e1002403

2012

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Alpha Helices Are More Robust to Mutations than Beta Strands

PLoS computational biology, 2016-12, Vol.12 (12), p.e1005242-e1005242

2016

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InterPro in 2022

CATH: increased structural coverage of functional space

The InterPro protein families and domains database: 20 years on

CATH: an expanded resource to predict protein function through structure and sequence

VarSite: Disease variants and protein structure

Residue mutations and their impact on protein structure and function: detecting beneficial and pathogenic changes

Protein function prediction using domain families

Computational approaches to predict protein functional families and functional sites

Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

CATH: expanding the horizons of structure-based functional annotations for genome sequences

Functional classification of CATH superfamilies: a domain-based approach for protein function annotation

Biological impact of mutually exclusive exon switching

Generating functional protein variants with variational autoencoders

Protein function annotation using protein domain family resources

New functional families (FunFams) in CATH to improve the mapping of conserved functional sites to 3D structures

Protein function prediction – the power of multiplicity

Predicting human and viral protein variants affecting COVID-19 susceptibility and repurposing therapeutics

Gene3D: expanding the utility of domain assignments

An analysis of tissue-specific alternative splicing at the protein level

CATH FunFHMMer web server: protein functional annotations using functional family assignments

Low-Density Lipoprotein Receptor Gene Familial Hypercholesterolemia Variant Database: Update and Pathological Assessment

Exploring the structure and function paradigm

Analysis of temporal transcription expression profiles reveal links between protein function and developmental stages of Drosophila melanogaster

Exploring the evolution of novel enzyme functions within structurally defined protein superfamilies

Alpha Helices Are More Robust to Mutations than Beta Strands

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