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Chapter 15 - Mechanisms of horizontal gene transfer and DNA recombination

Molecular Medical Microbiology, 2024, p.309-324

Blakely, Garry W.

Third Edition, 2024

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Generation of Markerless Deletions in the Nosocomial Pathogen Clostridium difficile by Induction of DNA Double-Strand Breaks

Applied and environmental microbiology, 2019-02, Vol.85 (3)

2019

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Novel large-scale chromosomal transfer in Bacteroides fragilis contributes to its pan-genome and rapid environmental adaptation

Microbial genomics, 2017-11, Vol.3 (11)

2017

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High-throughput Identification of Bacteria Repellent Polymers for Medical Devices

Journal of visualized experiments, 2016-11 (117)

2016

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High-throughput Identification of Bacteria Repellent Polymers for Medical Devices

Journal of visualized experiments, 2016-11 (117)

2016

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A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data

Gigascience, 2015-12, Vol.4 (1), p.60-60, Article 60

2015

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A national perspective on prenatal testing for mitochondrial disease

European journal of human genetics : EJHG, 2014-11, Vol.22 (11), p.1255-1259

2014

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Bacteria repelling poly(methylmethacrylate- co -dimethylacrylamide) coatings for biomedical devices

Journal of materials chemistry. B, Materials for biology and medicine, 2014-10, Vol.2 (39), p.6723-6729

2014

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Bacteria repelling poly(methylmethacrylate- co -dimethylacrylamide) coatings for biomedical devices†Electronic supplementary information (ESI) available: Polymer microarray screening, including analysis of bacterial adhesion by fluorescence microscopy and SEM, and chemical composition of bacteria repelling polymers identified in the screen; polymer synthesis and characterisation; preparation of catheter pieces and solvent studies, and details for confocal imaging/analysis. See DOI: 10.1039/c4tb0

Journal of materials chemistry. B, Materials for biology and medicine, 2014-09, Vol.2 (39), p.6723-6729

2014

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Bacteria repelling poly(methylmethacrylate-co-dimethylacrylamide) coatings for biomedical devices† †Electronic supplementary information (ESI) available: Polymer microarray screening, including analysis of bacterial adhesion by fluorescence microscopy and SEM, and chemical composition of bacteria repelling polymers identified in the screen; polymer synthesis and characterisation; preparation of catheter pieces and solvent studies, and details for confocal imaging/analysis. See DOI: 10.1039/c4tb0

Journal of materials chemistry. B, Materials for biology and medicine, 2014-09, Vol.2 (39), p.6723-6729

2014

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ArdA proteins from different mobile genetic elements can bind to the EcoKI Type I DNA methyltransferase of E. coli K12

Biochimica et biophysica acta, 2014-03, Vol.1844 (3), p.505-511

2014

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Mutations of the domain forming the dimeric interface of the ArdA protein affect dimerization and antimodification activity but not antirestriction activity

The FEBS journal, 2013-10, Vol.280 (19), p.4903-4914

2013

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Mutations of the domain forming the dimeric interface of the A rd A protein affect dimerization and antimodification activity but not antirestriction activity

The FEBS journal, 2013-10, Vol.280 (19), p.4903-4914

2013

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Easing the global burden of diarrhoeal disease: can synthetic biology help?

Systems and synthetic biology, 2013-09, Vol.7 (3), p.73-78

2013

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Removal of a frameshift between the hsdM and hsdS genes of the EcoKI Type IA DNA restriction and modification system produces a new type of system and links the different families of Type I systems

Nucleic acids research, 2012-11, Vol.40 (21), p.10916

2012

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Exploring the DNA mimicry of the Ocr protein of phage T7

Nucleic acids research, 2012-09, Vol.40 (16), p.8129

2012

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Crossing the eukaryote-prokaryote divide: A ubiquitin homolog in the human commensal bacterium Bacteroides fragilis

Mobile genetic elements, 2012-05, Vol.2 (3), p.149-151

2012

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A unique homologue of the eukaryotic protein-modifier ubiquitin present in the bacterium Bacteroides fragilis, a predominant resident of the human gastrointestinal tract

Microbiology (Society for General Microbiology), 2011-11, Vol.157 (Pt 11), p.3071

2011

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Multi-drug resistant Bacteroides fragilis recovered from blood and severe leg wounds caused by an improvised explosive device (IED) in Afghanistan

Anaerobe, 2011-08, Vol.17 (4), p.152-155

2011

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Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis

Microbiology (Society for General Microbiology), 2010-11, Vol.156 (Pt 11), p.3255

2010

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Binding and degradation of fibrinogen by Bacteroides fragilis and characterization of a 54 kDa fibrinogen-binding protein

Microbiology (Society for General Microbiology), 2010-08, Vol.156 (Pt 8), p.2516

2010

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The structure of the KlcA and ArdB proteins reveals a novel fold and antirestriction activity against Type I DNA restriction systems in vivo but not in vitro

Nucleic acids research, 2010-03, Vol.38 (5), p.1723

2010

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Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance

Nucleic acids research, 2009-08, Vol.37 (15), p.4887

2009

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Protein folding in Escherichia coli: the chaperonin GroE and its substrates

Research in microbiology, 2009-05, Vol.160 (4), p.267-277

2009

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Mutational analysis of genes implicated in LPS and capsular polysaccharide biosynthesis in the opportunistic pathogen Bacteroides fragilis

Microbiology (Society for General Microbiology), 2009-04, Vol.155 (Pt 4), p.1039

2009

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Chapter 15 - Mechanisms of horizontal gene transfer and DNA recombination

Generation of Markerless Deletions in the Nosocomial Pathogen Clostridium difficile by Induction of DNA Double-Strand Breaks

Novel large-scale chromosomal transfer in Bacteroides fragilis contributes to its pan-genome and rapid environmental adaptation

High-throughput Identification of Bacteria Repellent Polymers for Medical Devices

High-throughput Identification of Bacteria Repellent Polymers for Medical Devices

A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data

A national perspective on prenatal testing for mitochondrial disease

Bacteria repelling poly(methylmethacrylate- co -dimethylacrylamide) coatings for biomedical devices

ArdA proteins from different mobile genetic elements can bind to the EcoKI Type I DNA methyltransferase of E. coli K12

Mutations of the domain forming the dimeric interface of the ArdA protein affect dimerization and antimodification activity but not antirestriction activity

Mutations of the domain forming the dimeric interface of the A rd A protein affect dimerization and antimodification activity but not antirestriction activity

Easing the global burden of diarrhoeal disease: can synthetic biology help?

Removal of a frameshift between the hsdM and hsdS genes of the EcoKI Type IA DNA restriction and modification system produces a new type of system and links the different families of Type I systems

Exploring the DNA mimicry of the Ocr protein of phage T7

Crossing the eukaryote-prokaryote divide: A ubiquitin homolog in the human commensal bacterium Bacteroides fragilis

A unique homologue of the eukaryotic protein-modifier ubiquitin present in the bacterium Bacteroides fragilis, a predominant resident of the human gastrointestinal tract

Multi-drug resistant Bacteroides fragilis recovered from blood and severe leg wounds caused by an improvised explosive device (IED) in Afghanistan

Twenty-eight divergent polysaccharide loci specifying within- and amongst-strain capsule diversity in three strains of Bacteroides fragilis

Binding and degradation of fibrinogen by Bacteroides fragilis and characterization of a 54 kDa fibrinogen-binding protein

The structure of the KlcA and ArdB proteins reveals a novel fold and antirestriction activity against Type I DNA restriction systems in vivo but not in vitro

Extensive DNA mimicry by the ArdA anti-restriction protein and its role in the spread of antibiotic resistance

Protein folding in Escherichia coli: the chaperonin GroE and its substrates

Mutational analysis of genes implicated in LPS and capsular polysaccharide biosynthesis in the opportunistic pathogen Bacteroides fragilis

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