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Interplay between the trigger loop and the F loop during RNA polymerase catalysis

Nucleic acids research, 2014-01, Vol.42 (1), p.544-552

2014

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A novel phage-encoded transcription antiterminator acts by suppressing bacterial RNA polymerase pausing

Nucleic acids research, 2012-05, Vol.40 (9), p.4052-4063

2012

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Interactions in the active site of Deinococcus radiodurans RNA polymerase during RNA proofreading

Biochemical and biophysical research communications, 2019-01, Vol.509 (1), p.161-166

2019

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A programmable pAgo nuclease with universal guide and target specificity from the mesophilic bacterium Kurthia massiliensis

Nucleic acids research, 2021-04, Vol.49 (7), p.4054-4065

2021

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DNA targeting and interference by a bacterial Argonaute nuclease

Nature (London), 2020-11, Vol.587 (7835), p.632-637

2020

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Strong temperature effects on the fidelity of target DNA recognition by a thermophilic pAgo nuclease

Biochimie, 2023-06, Vol.209, p.142-149

2023

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Factor-specific effects of mutations in the active site of RNA polymerase on RNA cleavage

Biochemical and biophysical research communications, 2020-02, Vol.523 (1), p.165-170

2020

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Unusual Guide-binding Pockets in RNA-targeting pAgo Nucleases

Journal of molecular biology, 2024-10, Vol.436 (20), p.168745, Article 168745

2024

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Antitermination protein P7 of bacteriophage Xp10 distinguishes different types of transcriptional pausing by bacterial RNA polymerase

Biochimie, 2020-03, Vol.170, p.57-64

2020

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Recognition of double-stranded DNA by the Rhodobacter sphaeroides Argonaute protein

Biochemical and biophysical research communications, 2020-12, Vol.533 (4), p.1484-1489

2020

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Prokaryotic Argonaute nuclease cooperates with co-encoded RNase to acquire guide RNAs and target invader DNA

Nucleic acids research, 2024-05

2024

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σ38-dependent promoter-proximal pausing by bacterial RNA polymerase

Nucleic acids research, 2017-04, Vol.45 (6), p.3006-3016

2017

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Specific targeting of plasmids with Argonaute enables genome editing

Nucleic acids research, 2023-05, Vol.51 (8), p.4086-4099

2023

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Sensing of DNA modifications by pAgo proteins in vitro

Biochimie, 2024-05, Vol.220, p.39-47

2024

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Effects of natural polymorphisms in SARS-CoV-2 RNA-dependent RNA polymerase on its activity and sensitivity to inhibitors in vitro

Biochimie, 2023-03, Vol.206, p.81-88

2023

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Region 3.2 of the σ factor controls the stability of rRNA promoter complexes and potentiates their repression by DksA

Nucleic acids research, 2018-11, Vol.46 (21), p.11477-11487

2018

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Bacterial Argonaute nucleases reveal different modes of DNA targeting in vitro and in vivo

Nucleic acids research, 2023-06, Vol.51 (10), p.5106-5124

2023

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DNA synthesis across DNA hairpins by human PrimPol

DNA repair, 2024-10, Vol.142, p.103741, Article 103741

2024

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Rewiring of growth-dependent transcription regulation by a point mutation in region 1.1 of the housekeeping σ factor

Nucleic acids research, 2020-11, Vol.48 (19), p.10802-10819

2020

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Lineage-specific variations in the trigger loop modulate RNA proofreading by bacterial RNA polymerases

Nucleic acids research, 2016-02, Vol.44 (3), p.1298-1308

2016

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Structural transitions in the transcription elongation complexes of bacterial RNA polymerase during σ-dependent pausing

Nucleic acids research, 2012-04, Vol.40 (7), p.3078-3091

2012

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DNA-targeting short Argonautes complex with effector proteins for collateral nuclease activity and bacterial population immunity

Nature microbiology, 2024-05, Vol.9 (5), p.1368-1381

2024

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Interplay between the trigger loop and the F loop during RNA polymerase catalysis

A novel phage-encoded transcription antiterminator acts by suppressing bacterial RNA polymerase pausing

Interactions in the active site of Deinococcus radiodurans RNA polymerase during RNA proofreading

A programmable pAgo nuclease with universal guide and target specificity from the mesophilic bacterium Kurthia massiliensis

DNA targeting and interference by a bacterial Argonaute nuclease

Strong temperature effects on the fidelity of target DNA recognition by a thermophilic pAgo nuclease

Factor-specific effects of mutations in the active site of RNA polymerase on RNA cleavage

Unusual Guide-binding Pockets in RNA-targeting pAgo Nucleases

Antitermination protein P7 of bacteriophage Xp10 distinguishes different types of transcriptional pausing by bacterial RNA polymerase

Recognition of double-stranded DNA by the Rhodobacter sphaeroides Argonaute protein

Prokaryotic Argonaute nuclease cooperates with co-encoded RNase to acquire guide RNAs and target invader DNA

σ38-dependent promoter-proximal pausing by bacterial RNA polymerase

Specific targeting of plasmids with Argonaute enables genome editing

Sensing of DNA modifications by pAgo proteins in vitro

Effects of natural polymorphisms in SARS-CoV-2 RNA-dependent RNA polymerase on its activity and sensitivity to inhibitors in vitro

Region 3.2 of the σ factor controls the stability of rRNA promoter complexes and potentiates their repression by DksA

Bacterial Argonaute nucleases reveal different modes of DNA targeting in vitro and in vivo

DNA synthesis across DNA hairpins by human PrimPol

Rewiring of growth-dependent transcription regulation by a point mutation in region 1.1 of the housekeeping σ factor

Lineage-specific variations in the trigger loop modulate RNA proofreading by bacterial RNA polymerases

Structural transitions in the transcription elongation complexes of bacterial RNA polymerase during σ-dependent pausing

DNA-targeting short Argonautes complex with effector proteins for collateral nuclease activity and bacterial population immunity

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