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High-resolution array CGH analysis of salivary gland tumors reveals fusion and amplification of the FGFR1 and PLAG1 genes in ring chromosomes
Ist Teil von
Oncogene, 2008-05, Vol.27 (21), p.3072-3080
Ort / Verlag
London: Nature Publishing Group UK
Erscheinungsjahr
2008
Quelle
MEDLINE
Beschreibungen/Notizen
We have previously identified a subgroup of pleomorphic salivary gland adenomas with ring chromosomes of uncertain derivation. Here, we have used spectral karyotyping (SKY), fluorescence
in situ
hybridization (FISH) and high-resolution oligonucleotide array-CGH to determine the origin and content of these rings and to identify genes disrupted as a result of ring formation. Of 16 tumors with rings, 11 were derived from chromosome 8, 3 from chromosome 5 and 1 each from chromosomes 1, 6 and 9. Array-CGH revealed that 10/11 r(8) consisted of amplification of a 19 Mb pericentromeric segment with recurrent breakpoints in
FGFR1
in 8p12 and in
PLAG1
in 8q12.1. Molecular analyses revealed that ring formation consistently generated novel
FGFR1–PLAG1
gene fusions in which the 5′-part of
FGFR1
is linked to the coding sequence of
PLAG1
. An alternative mechanism of
PLAG1
activation was found in tumors with copy number gain of an intact
PLAG1
gene. Rings derived from chromosomes 1, 5, 6 or 9 did not result in gene fusions, but rather resulted in losses indicative of the involvement of putative tumor suppressor genes on 8p, 5p, 5q and/or 6q. Our findings also reveal a novel mechanism by which
FGFR1
contributes to oncogenesis and further illustrate the versatility of the
FGFR1
and
PLAG1
genes in tumorigenesis.