Bioinformatics, 2009-08, Vol.25 (16), p.2071-2073
2009
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Details
- Autor(en) / Beteiligte
- Titel
- Reordering contigs of draft genomes using the Mauve Aligner
- Ist Teil von
- Bioinformatics, 2009-08, Vol.25 (16), p.2071-2073
- Ort / Verlag
- Oxford: Oxford University Press
- Erscheinungsjahr
- 2009
- Quelle
- MEDLINE
- Beschreibungen/Notizen
- Mauve Contig Mover provides a new method for proposing the relative order of contigs that make up a draft genome based on comparison to a complete or draft reference genome. A novel application of the Mauve aligner and viewer provides an automated reordering algorithm coupled with a powerful drill-down display allowing detailed exploration of results. Availability: The software is available for download at http://gel.ahabs.wisc.edu/mauve. Contact: rissman@wisc.edu Supplementary information: Supplementary data are available at Bioinformatics online and http://gel.ahabs.wisc.edu
- Sprache
- Englisch
- Identifikatoren
- ISSN: 1367-4803eISSN: 1460-2059, 1367-4811DOI: 10.1093/bioinformatics/btp356Titel-ID: cdi_pubmedcentral_primary_oai_pubmedcentral_nih_gov_2723005
- Format
- –
- Schlagworte
- Algorithms, Alignment, Applications Note, Bioinformatics, Biological and medical sciences, Computer programs, Contig Mapping, Exploration, Fundamental and applied biological sciences. Psychology, General aspects, Genome, Genomes, Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects), On-line systems, Sequence Alignment - methods, Sequence Analysis, DNA - methods, Software