Details

Autor(en) / Beteiligte

• Beard, Daniel A.
• Britten, Randall
• Cooling, Mike T.
• Garny, Alan
• Halstead, Matt D.B.
• Hunter, Peter J.
• Lawson, James
• Lloyd, Catherine M.
• Marsh, Justin
• Miller, Andrew
• Nickerson, David P.
• Nielsen, Poul M.F.
• Nomura, Taishin
• Subramanium, Shankar
• Wimalaratne, Sarala M.
• Yu, Tommy

Titel

CellML metadata standards, associated tools and repositories

Ist Teil von

• Philosophical transactions of the Royal Society of London. Series A: Mathematical, physical, and engineering sciences, 2009-05, Vol.367 (1895), p.1845-1867

Ort / Verlag

London: The Royal Society

Erscheinungsjahr

2009

Quelle

MEDLINE

Beschreibungen/Notizen

• The development of standards for encoding mathematical models is an important component of model building and model sharing among scientists interested in understanding multi-scale physiological processes. CellML provides such a standard, particularly for models based on biophysical mechanisms, and a substantial number of models are now available in the CellML Model Repository. However, there is an urgent need to extend the current CellML metadata standard to provide biological and biophysical annotation of the models in order to facilitate model sharing, automated model reduction and connection to biological databases. This paper gives a broad overview of a number of new developments on CellML metadata and provides links to further methodological details available from the CellML website.