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Annual review of microbiology, 2000-01, Vol.54 (1), p.341-411
Ort / Verlag
Palo Alto, CA 94303-0139: Annual Reviews
Erscheinungsjahr
2000
Quelle
MEDLINE
Beschreibungen/Notizen
We present a summary of recent progress in understanding
Escherichia
coli
K-12 gene and protein functions. New information has come both from
classical biological experimentation and from using the analytical tools of
functional genomics. The content of the
E. coli
genome can clearly be
seen to contain elements acquired by horizontal transfer. Nevertheless, there
is probably a large, stable core of >3500 genes that are shared among all
E. coli
strains. The gene-enzyme relationship is examined, and, in many
cases, it exhibits complexity beyond a simple one-to-one relationship. Also,
the
E. coli
genome can now be seen to contain many multiple enzymes that
carry out the same or closely similar reactions. Some are similar in sequence
and may share common ancestry; some are not. We discuss the concept of a
minimal genome as being variable among organisms and obligatorily linked to
their life styles and defined environmental conditions. We also address
classification of functions of gene products and avenues of insight into the
history of protein evolution.