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Identification of a candidate gene underlying qHKW3, a QTL for hundred-kernel weight in maize
Ist Teil von
Theoretical and applied genetics, 2022-05, Vol.135 (5), p.1579-1589
Ort / Verlag
Berlin/Heidelberg: Springer Berlin Heidelberg
Erscheinungsjahr
2022
Quelle
Alma/SFX Local Collection
Beschreibungen/Notizen
Key message
qHKW3
, a quantitative trait locus for hundred-kernel weight, harbors the proposed causal gene
Zm00001d044081
, encoding a homeobox-leucine zipper protein (ATHB-4) that might affect kernel size and weight.
Kernel size and weight are key traits that contribute greatly to grain yield per year in maize (
Zea mays
). Here, we developed the chromosome segment substitution line (CSSL), H15-6-2, with smaller kernel size and lower kernel weight across environments compared to the background line Ye478. Histological analysis suggested that a slower kernel filling rate of H15-6-2 contributes to its small-kernel size and reduced hundred-kernel weight. We identified a quantitative trait locus (QTL) explaining 23% of the phenotypic variation in hundred-kernel weight. This QTL,
qHKW3
, was fine mapped to an interval of approximately 40.66-kb harboring the gene
Zm00001d044081
. The upstream sequence and its expression level of
Zm00001d044081
in kernels at 6 days after pollination (DAP) showed obvious differences between the near-isogenic lines HKW3
Ye478
and HKW3
H15-6-2
. We further confirmed the effects of the
Zm00001d044081
promoter on maize kernel size and weight in an independent association mapping panel with 513 lines by candidate regional association analysis. We propose that
Zm00001d044081
, which encodes the homeobox-leucine zipper protein ATHB-4, is the causal gene of
qHKW3
, representing an attractive target for the genetic improvement of maize yield.