Details

Autor(en) / Beteiligte

• Narsing Rao, Manik Prabhu
• Dong, Zhou-Yan
• Jiao, Jian-Yu
• Zhou, Yu
• Zhao, Jiao
• Xiao, Min
• Li, Wen-Jun

Titel

Genome sequence and comparative analysis of DRQ-2, the type strain of Nonomuraea indica

Ist Teil von

• Genomics (San Diego, Calif.), 2020-07, Vol.112 (4), p.2842-2844

Ort / Verlag

United States: Elsevier Inc

Erscheinungsjahr

2020

Quelle

MEDLINE

Beschreibungen/Notizen

• Strain DRQ-2T (type strain of Nonomuraea indica) is worthy for genome sequencing, due to its ability to produce a wide variety of industrially important enzymes such as amylase, asparaginase, cellulase, gelatinase, glutaminase, and protease. Genome sequencing and comparison of strain DRQ-2T is described in the present work. The genome size was estimated to be 8,288,417 (bp) that consisted of 59 contigs. The G + C content of the genome was 72.4%. A total of 7730 genes were predicted with two rRNAs and 64 tRNAs. The genome analysis of the strain DRQ-2T showed the presence of a wide range of secondary metabolite gene clusters. Pan-Genomes Analysis Pipeline (PGAP) indicated that strain DRQ-2T had large numbers of unique genes. The majority of N. indica DRQ-2T genes encode for hypothetical proteins, indicating the functions of these ortholog clusters were still remain to be determined. •Nonomuraea indica genome sequencing and comparison•Nonomuraea indica showed the presence of the genes related to oxidative and osmotic stress.•Secondary metabolite gene clusters including terpene, terpene-t1pks, and saccharide were observed in Nonomuraea indica.