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Liver virome of healthy pigs reveals diverse small ssDNA viral genomes
Ist Teil von
Infection, genetics and evolution, 2020-07, Vol.81, p.104203-104203, Article 104203
Ort / Verlag
Netherlands: Elsevier B.V
Erscheinungsjahr
2020
Quelle
Alma/SFX Local Collection
Beschreibungen/Notizen
Brazil is a major exporter of pork meat worldwide. Swine liver is a common ingredient in food consumed by humans, thus emphasizing the importance of evaluating the presence of associated pathogens in swine liver. To obtain knowledge, this study aimed to provide insights into the viral communities of livers collected from slaughtered pigs from southern Brazil. The 46 livers were processed and submitted for high-throughput sequencing (HTS). The sequences were most closely related to Anelloviridae, Circoviridae and Parvoviridae families. The present work also describes the first Brazilian PCV1 and the first PPV6 and PPV7 from South America. Virus frequencies revelead 63% of samples positive for TTSuV1, 71% for TTSuVk2, 10.8% for PCV, 13% for PPV and 6% for PBov. This report addresses the diversity of the liver virome of healthy pigs and expands the number of viruses detected, further characterizing their genomes to assist future studies.
•Swine liver virome via high-throughput sequencing method.•This work identified prevalent swine pathogens, such as TTV, PCV, PPV and PBov.•First PCV1 in Brazil and the first PPV6 and PPV7 sequences from South America.