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Penaeid shrimp brachyury: sequence analysis and expression during gastrulation
Ist Teil von
Development genes and evolution, 2018-09, Vol.228 (5), p.219-225
Ort / Verlag
Berlin/Heidelberg: Springer Berlin Heidelberg
Erscheinungsjahr
2018
Quelle
MEDLINE
Beschreibungen/Notizen
Gastrulation occurs by a variety of morphogenetic movements, often correlated with diverse expression of the T-box transcription factor Brachyury (Bra). Bra may be expressed in ectoderm, mesoderm, or endoderm, but its role in cell fate specification or regulation of gastrulation movements has not been studied in the development of crustaceans. Penaeid shrimp (Decapoda: Dendrobranchiata: Penaeidae) develop by complete cleavage and gastrulation by invagination to a free-swimming nauplius larva. Penaeid gastrulation diverges from other decapods and from insects, occurring early at a low cell number with the formation of a radial invagination. Toward a better understanding of gastrulation movements in penaeid shrimp,
bra
was identified from newly available penaeid shrimp genomes and transcriptomes of
Litopenaeus vannamei
,
Marsupenaeus japonicus
, and
Penaeus monodon
. Additional
bra
homologs were obtained from the outgroups
Sicyonia ingentis
(Decapoda: Dendrobranchiata: Sicyoniidae) and the caridean shrimp
Caridina multidentata
(Decapoda: Pleocymata). The genes encoded penaeid shrimp Bra proteins of 551–552 amino acids, containing the highly conserved T-box DNA-binding region. The N-terminal Smad1-binding domain, conserved in most animals, was absent in shrimp Bra. The R1 repressor domain was the best conserved of the C-terminal regulatory domains, which were widely divergent compared to other species. The penaeid shrimp
bra
gene consisted of six exons, with splice sites conserved with other phyla across the animal kingdom. Real-time qPCR and FPKM analysis showed that shrimp
bra
mRNA was strongly expressed during gastrulation. These findings begin to address the evolution of gastrulation in shrimp at the molecular level.