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Details

Autor(en) / Beteiligte
Titel
Improved Detection of Invasive Pulmonary Aspergillosis Arising during Leukemia Treatment Using a Panel of Host Response Proteins and Fungal Antigens
Ist Teil von
  • PloS one, 2015-11, Vol.10 (11), p.e0143165-e0143165
Ort / Verlag
United States: Public Library of Science
Erscheinungsjahr
2015
Link zum Volltext
Quelle
Free E-Journal (出版社公開部分のみ)
Beschreibungen/Notizen
  • Invasive pulmonary aspergillosis (IPA) is an opportunistic fungal infection in patients undergoing chemotherapy for hematological malignancy, hematopoietic stem cell transplant, or other forms of immunosuppression. In this group, Aspergillus infections account for the majority of deaths due to mold pathogens. Although early detection is associated with improved outcomes, current diagnostic regimens lack sensitivity and specificity. Patients undergoing chemotherapy, stem cell transplantation and lung transplantation were enrolled in a multi-site prospective observational trial. Proven and probable IPA cases and matched controls were subjected to discovery proteomics analyses using a biofluid analysis platform, fractionating plasma into reproducible protein and peptide pools. From 556 spots identified by 2D gel electrophoresis, 66 differentially expressed post-translationally modified plasma proteins were identified in the leukemic subgroup only. This protein group was rich in complement components, acute-phase reactants and coagulation factors. Low molecular weight peptides corresponding to abundant plasma proteins were identified. A candidate marker panel of host response (9 plasma proteins, 4 peptides), fungal polysaccharides (galactomannan), and cell wall components (β-D glucan) were selected by statistical filtering for patients with leukemia as a primary underlying diagnosis. Quantitative measurements were developed to qualify the differential expression of the candidate host response proteins using selective reaction monitoring mass spectrometry assays, and then applied to a separate cohort of 57 patients with leukemia. In this verification cohort, a machine learning ensemble-based algorithm, generalized pathseeker (GPS) produced a greater case classification accuracy than galactomannan (GM) or host proteins alone. In conclusion, Integration of host response proteins with GM improves the diagnostic detection of probable IPA in patients undergoing treatment for hematologic malignancy. Upon further validation, early detection of probable IPA in leukemia treatment will provide opportunities for earlier interventions and interventional clinical trials.
Sprache
Englisch
Identifikatoren
ISSN: 1932-6203
eISSN: 1932-6203
DOI: 10.1371/journal.pone.0143165
Titel-ID: cdi_plos_journals_1734277332
Format
Schlagworte
Algorithms, Amino Acid Sequence, Antigens, Antigens, Fungal - metabolism, Aspergillosis, Aspergillus, Aspergillus fumigatus, Biochemistry, Biomarkers, Biomarkers - metabolism, Blood Proteins - metabolism, Care and treatment, Case-Control Studies, Cell adhesion & migration, Cell walls, Chemotherapy, Clinical trials, Coagulation, Cohort Studies, Complications and side effects, Consent, Consortia, Diagnosis, Diagnostic systems, Female, Filtration, Fractionation, Fungal antigens, Fungal infections, Fungi, Gel electrophoresis, Glucan, Health aspects, Hematology, Hematopoietic stem cell transplantation, Hematopoietic stem cells, Hemopoiesis, Humans, Immunosuppression, Infections, Infectious diseases, Internal medicine, Invasive Pulmonary Aspergillosis - diagnosis, Invasive Pulmonary Aspergillosis - etiology, Invasiveness, Learning algorithms, Leukemia, Leukemia - complications, Leukemia - drug therapy, Low molecular weights, Lung transplantation, Machine Learning, Male, Malignancy, Mass Spectrometry, Mass spectroscopy, Medical diagnosis, Medical research, Middle Aged, Models, Biological, Molecular biology, Molecular Sequence Data, Molecular weight, Patients, Peptides, Peptides - chemistry, Peptides - metabolism, Plasma proteins, Polysaccharides, Post-translation, Preventive medicine, Proteins, Proteomics, Pulmonary aspergillosis, Reproducibility of Results, Risk factors, ROC Curve, Saccharides, Stem cell transplantation, Stem cells, Syngeneic grafts, Transplantation

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