PloS one, 2014-05, Vol.9 (5), p.e96821-e96821
2014
Volltextzugriff (PDF)
Details
- Autor(en) / Beteiligte
- Titel
- RNAbrowse: RNA-Seq de novo assembly results browser
- Ist Teil von
- PloS one, 2014-05, Vol.9 (5), p.e96821-e96821
- Ort / Verlag
- United States: Public Library of Science
- Erscheinungsjahr
- 2014
- Quelle
- Free E-Journal (出版社公開部分のみ）
- Beschreibungen/Notizen
- Transcriptome analysis based on a de novo assembly of next generation RNA sequences is now performed routinely in many laboratories. The generated results, including contig sequences, quantification figures, functional annotations and variation discovery outputs are usually bulky and quite diverse. This article presents a user oriented storage and visualisation environment permitting to explore the data in a top-down manner, going from general graphical views to all possible details. The software package is based on biomart, easy to install and populate with local data. The software package is available under the GNU General Public License (GPL) at http://bioinfo.genotoul.fr/RNAbrowse.
- Sprache
- Englisch
- Identifikatoren
- ISSN: 1932-6203eISSN: 1932-6203DOI: 10.1371/journal.pone.0096821Titel-ID: cdi_plos_journals_1524225268
- Format
- –
- Schlagworte
- Annotations, Archives & records, Assembly, Bioinformatics, Biologists, Biology, Biology and Life Sciences, Computational Biology - methods, Computer and Information Sciences, Computer programs, Computer Science, Gene expression, Gene Expression Profiling, Gene sequencing, Genomes, Graphs, Humans, Internet, Life Sciences, Mathematics, Ribonucleic acid, RNA, Sequence Analysis, RNA - methods, Software, User interface, User-Computer Interface