Details

Autor(en) / Beteiligte

• Rangam, Gopinath
• Schmitz, Kerstin-Maike
• Cobb, Alexander J A
• Petersen-Mahrt, Svend K
• Fugmann, Sebastian D.

Titel

AID enzymatic activity is inversely proportional to the size of cytosine C5 orbital cloud

Ist Teil von

• PloS one, 2012-08, Vol.7 (8), p.e43279-e43279

Ort / Verlag

United States: Public Library of Science

Erscheinungsjahr

2012

Link zum Volltext

Quelle

Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals

Beschreibungen/Notizen

• Activation induced deaminase (AID) deaminates cytosine to uracil, which is required for a functional humoral immune system. Previous work demonstrated, that AID also deaminates 5-methylcytosine (5 mC). Recently, a novel vertebrate modification (5-hydroxymethylcytosine - 5 hmC) has been implicated in functioning in epigenetic reprogramming, yet no molecular pathway explaining the removal of 5 hmC has been identified. AID has been suggested to deaminate 5 hmC, with the 5 hmU product being repaired by base excision repair pathways back to cytosine. Here we demonstrate that AID's enzymatic activity is inversely proportional to the electron cloud size of C5-cytosine - H > F > methyl >> hydroxymethyl. This makes AID an unlikely candidate to be part of 5 hmC removal.