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Lack of Association of the Ala45Thr Polymorphism and Other Common Variants of the NeuroD Gene With Type 1 Diabetes
Ist Teil von
Diabetes (New York, N.Y.), 2004-04, Vol.53 (4), p.1158-1161
Ort / Verlag
Alexandria, VA: American Diabetes Association
Erscheinungsjahr
2004
Quelle
EZB Electronic Journals Library
Beschreibungen/Notizen
Lack of Association of the Ala 45 Thr Polymorphism and Other Common Variants of the NeuroD Gene With Type 1 Diabetes
Adrian Vella 1 ,
Joanna M.M. Howson 1 ,
Bryan J. Barratt 1 ,
Rebecca C.J. Twells 1 ,
Helen E. Rance 1 ,
Sarah Nutland 1 ,
Eva Tuomilehto-Wolf 2 ,
Jaakko Tuomilehto 2 3 ,
Dag E. Undlien 4 ,
Kjersti S. Rønningen 5 ,
Cristian Guja 6 ,
Constantin Ionescu-Tîrgovişte 6 ,
David A. Savage 7 and
John A. Todd 1
1 Juvenile Diabetes Research Foundation/Wellcome Trust Diabetes and Inflammation Laboratory, Cambridge Institute for Medical
Research, University of Cambridge, Cambridge, U.K
2 Diabetes and Genetic Epidemiology Unit, National Public Health Institute, University of Helsinki, Helsinki, Finland
3 Department of Public Health, University of Helsinki, Helsinki, Finland
4 Institute of Medical Genetics, Ulleval University Hospital, University of Oslo, Oslo, Norway
5 Laboratory of Molecular Epidemiology, Division of Epidemiology, Norwegian Institute of Public Health, Oslo, Norway
6 Clinic of Diabetes, Institute of Diabetes, Nutrition and Metabolic Diseases ‘N. Paulescu,’ Bucharest, Romania
7 Department of Medical Genetics, Queen’s University Belfast, Belfast City Hospital, Belfast, Northern Ireland
Address correspondence and reprint requests to Professor John A. Todd, JDRF/WT Diabetes and Inflammation Laboratory, University
of Cambridge, Cambridge Institute for Medical Research, Wellcome Trust/MRC Building, Addenbrooke’s Hospital, Hills Road, Cambridge
CB2 2XY, U.K. E-mail: john.todd{at}cimr.cam.ac.uk
Abstract
Variation in genes necessary for normal functioning and development of β-cells, e.g., NEUROD1, which encodes a transcription
factor for the insulin gene and is important in β-cell development, causes maturity-onset diabetes of the young. Some studies
have reported an association between a nonsynonymous Ala 45 Thr (+182G→A) single nucleotide polymorphism (SNP) in NEUROD1 and type 1 diabetes, but this result has not been consistently
found. To clarify this, we genotyped Ala 45 Thr in 2,434 type 1 diabetic families of European descent and Caucasian ethnicity from five different countries. Taking the
allele frequency of 36% for Thr 45 and an odds ratio (OR) of 1.2, this sample provided >99% power to detect an association ( P < 0.05). We could not confirm the association ( P = 0.77). No evidence of population heterogeneity in the lack of association of Thr 45 with type 1 diabetes was observed. To evaluate the possibility that another NEUROD1 variant was associated with type 1 diabetes,
we resequenced the gene in 32 U.K. affected individuals and identified and genotyped all common SNPs (minor allele frequency
>10%; n = 5) in 786 families. We report no evidence of association of these common variants in NEUROD1 and type 1 diabetes in these
samples.
MODY, maturity-onset diabetes of the young
SNP, single nucleotide polymorphism
TDT, transmission disequilibrium test
Footnotes
Additional information for this article can be found in an online appendix at http://diabetes.diabetesjournals.org .
Accepted January 5, 2004.
Received December 18, 2003.
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